HHsearch results for GI: 254780801 and protein with PDBid: 2nva_A
>2nva_A Arginine decarboxylase, A207R protein; PLP, TIM barrel, eukaryotic ODC- like, lyase; HET: PL2; 1.80A {Paramecium bursaria chlorella virus 1} PDB: 2nv9_A*
Probab=94.37 E-value=0.3 Score=28.28 Aligned_cols=137 Identities=12% Similarity=0.053 Sum_probs=84.1
Q ss_pred HHCEEEEECCCCCHHHHHH-HHHCCCCCCCCCCCHHHHHH-HHCCCCCCCCCEEEECCCCCC-HHHHHCCCCHHCCCCCC
Q ss_conf 4418998718999999999-99729810001210001111-000001258730230244320-01320111000012222
Q gi|254780801|r 26 DSVSLVAVSKMVDSKKIRV-ALSCGQVIFAENKLQEAKKK-WIPLRKEWDVQLRFIGSLQSN-KVSEIVSLFDVIETVSR 102 (222)
Q Consensus 26 ~~v~LiaVtK~~~~e~I~~-~~~~G~~~fGENrvQE~~~K-~~~l~~~~~i~wHfIG~LQsN-Kvk~i~~~~~~Ihsvds 102 (222)
+.|++-=..|.-|...|.. +.+.|. -|-=.-..|+..- ...++ +-+..|-|+.-+. -++.++..--.|-++|+
T Consensus 39 p~v~~~YAvKaN~~~~vl~~l~~~G~-G~dv~S~~El~~al~~G~~---~~~Ii~~g~~K~~~el~~ai~~gv~i~~~ds 114 (372)
T 2nva_A 39 PRVTPHYAVKCNNDEVLLKTMCDKNV-NFDCASSSEIKKVIQIGVS---PSRIIFAHTMKTIDDLIFAKDQGVDIATFDS 114 (372)
T ss_dssp TTEEEEEEGGGCCCHHHHHHHHHTTC-EEEECSHHHHHHHHHHTCC---GGGEEECCSCCCHHHHHHHHHHTCCEEEECS
T ss_pred CCCEEEEEECCCCCHHHHHHHHHCCC-EEEEECHHHHHHHHHCCCC---HHHEEECCCCCCHHHHHHHHHCCCCCCCCCH
T ss_conf 89869888511898999999998498-4999699999999985979---1249994898999999999985997002653
Q ss_pred CCHHHHHHHHHHHHCCCEEEEEEEECC------CCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHEEC-CCCCCCCH
Q ss_conf 200134433333311430368897004------6656346570001222344310431100111011-54334520
Q gi|254780801|r 103 EKTASLLSLEMIKQSRFLPVYIQVNTG------YEIQKSGIMPNQTKDFVILCRQKYQLNVEGLMCI-PPAMGNPK 171 (222)
Q Consensus 103 ~~~a~~L~~~~~~~~~~~~vliQVN~~------~e~~K~G~~p~el~~l~~~i~~~~~L~i~GLMti-~p~~~d~~ 171 (222)
....+.+.+.... .++.+.++.. ...+|+|+.+.++.++....+ ..++++.||... +....++.
T Consensus 115 ~~~~~~i~~~~~~----~~~~~~~~~~~~~~~~~~~~~fg~~~~~~~~~~~~a~-~~~l~~~GlH~H~gS~~~~~~ 185 (372)
T 2nva_A 115 SFELDKIHTYHPN----CKMILRIRCDDPNATVQLGNKFGANEDEIRHLLEYAK-QLDIEVIGISFHVGSGSRNPE 185 (372)
T ss_dssp HHHHHHHHHHCTT----CEEEEEBCCCCTTCSBCCTTTSSBCGGGHHHHHHHHH-HTTCCEEEEECCCCBSBCCHH
T ss_pred HHHHHHHHHHCCC----CCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHH-HCCCEEEEEEEECCCCCCCHH
T ss_conf 9999999875513----3321011015675544568877777177799999998-569818899986687658768