HHsearch results for GI: 254780801 and protein with PDBid: 3co8_A
>3co8_A Alanine racemase; protein structure initiative II, PSI-II, NYSGXRC, PLP, TIM barrel, structural genomics; HET: PLP; 1.70A {Oenococcus oeni psu-1}
Probab=99.32 E-value=3.5e-11 Score=95.06 Aligned_cols=203 Identities=14% Similarity=0.161 Sum_probs=130.6
Q ss_pred HHHHHHHHHHHHHHCCCCHHHCEEEEECCC----CCHHHHHH-HHHCCCCCCCCCCCHHHHHHHHCCCCCCCCCEEEECC
Q ss_conf 999999999999981989644189987189----99999999-9972981000121000111100000125873023024
Q gi|254780801|r 7 LQVFKQKIENSAILAKRPKDSVSLVAVSKM----VDSKKIRV-ALSCGQVIFAENKLQEAKKKWIPLRKEWDVQLRFIGS 81 (222)
Q Consensus 7 l~~i~~~I~~a~~~~gR~~~~v~LiaVtK~----~~~e~I~~-~~~~G~~~fGENrvQE~~~K~~~l~~~~~i~wHfIG~ 81 (222)
++.++.+++...+.++ ..+++||-|. +....|.. +.++|++.||--+++|+.+=.... .+...-..|+
T Consensus 16 l~al~~N~~~ir~~~~----~~~i~aVVKanAYGhG~~~va~~l~~~Gv~~faVa~~~EA~~LR~~g---i~~~Ilvl~~ 88 (380)
T 3co8_A 16 KSSLAYNVQYTKQVSG----AKTLWLAVKSNAYGHGLLQVSKIARECGVDGLAVSVLDEGIAIRQAG---IDDFILILGP 88 (380)
T ss_dssp HHHHHHHHHHHHHHHC----CSEEEEECHHHHHTTCHHHHHHHHGGGTCCEEEESSHHHHHHHHHTT---CCCCEEECSC
T ss_pred HHHHHHHHHHHHHHCC----CCEEEEEEEECCCCCCHHHHHHHHHHCCCCEEEEEEHHHHHHHHHCC---CCCCEEEEEC
T ss_conf 9999999999985579----98499999743464789999999998697999991999999999739---9983899725
Q ss_pred CCCCHHHHHCCCCHHCCCCCCCCHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCC-HHHHHHHHHHC-CCCCCHHH
Q ss_conf 43200132011100001222220013443333331143036889700466563465700-01222344310-43110011
Q gi|254780801|r 82 LQSNKVSEIVSLFDVIETVSREKTASLLSLEMIKQSRFLPVYIQVNTGYEIQKSGIMPN-QTKDFVILCRQ-KYQLNVEG 159 (222)
Q Consensus 82 LQsNKvk~i~~~~~~Ihsvds~~~a~~L~~~~~~~~~~~~vliQVN~~~e~~K~G~~p~-el~~l~~~i~~-~~~L~i~G 159 (222)
+...-...++. .+++-+|.+...++.+++.+. +++++|.|+|++| .+|.||.|+ ++.++++.+.+ .+++++.|
T Consensus 89 ~~~~~~~~~~~-~~l~~~i~s~~~l~~l~~~~~--~~~~~VhLkiDTG--M~RlG~~~~~~~~~~~~~l~~~~~~l~~~G 163 (380)
T 3co8_A 89 IDVKYAPIASK-YHFLTTVSSLDWLKSADKILG--KEKLSVNLAVDTG--MNRIGVRSKKDLKDEIEFLQEHSDHFSYDG 163 (380)
T ss_dssp CCGGGHHHHHH-TTCEEEECCHHHHHHHHHHCT--TCCEEEEEEBCSS--SCSSSBCSHHHHHHHHHHHHHCTTTEEEEE
T ss_pred CCHHHHHHHHH-HCCCCCCCCHHHHHHHHHHHC--CCCCEEEEEEECC--CCCCCCCCHHHHHHHHHHHHHHCCCCCCCE
T ss_conf 42123368887-253100024999999999734--6884389998268--986777734678999999764113544002
Q ss_pred HEECCCCCCCC-----HHHHHHHHHHHHHCCCCEE-CCCCCHHHHHHHH---HCCCEEEECHHHCCCCCCC
Q ss_conf 10115433452-----0589999999887589472-2477734899998---0898899711323899999
Q gi|254780801|r 160 LMCIPPAMGNP-----KPHFYLLSEIARECKLTKL-SMGMTRDFELAIA---SGATSVRIGSGIFGERPCQ 221 (222)
Q Consensus 160 LMti~p~~~d~-----~~~F~~l~~l~~~~~~~~L-SmGMS~D~~~Ai~---~Gst~vRiGs~iFG~R~~~ 221 (222)
+||--+..+++ ..++..+.++.+.+....+ ++-.|+---.... ..-+|||+|.+|||-.|.+
T Consensus 164 i~SHfa~ad~~~~~~~~~q~~~f~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~d~vR~Gi~lYG~~p~~ 234 (380)
T 3co8_A 164 IFTHFASSDNPDDHYFQRQKNRWYELIDGLIMPRYVHVMNSGAAMYHSKELPGCNSIARVGTVVYGVEPSE 234 (380)
T ss_dssp EECCCC---------CHHHHHHHHHHHTTSCCCSEEECBCHHHHHHCGGGCTTSCSEEEESTTTTTCCTTT
T ss_pred EEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHCHHHHHCCCHHCCCCCCCCCCCCEEECCCCCC
T ss_conf 66202366777647889999999999974357531455331656358111564322346772224567874