HHsearch results for GI: 254780801 and protein with PDBid: 3n2b_A
>3n2b_A Diaminopimelate decarboxylase; LYSA, lyase, structural genom center for structural genomics of infectious diseases, CSGI; 1.80A {Vibrio cholerae}
Probab=97.77 E-value=0.00032 Score=48.26 Aligned_cols=179 Identities=13% Similarity=0.073 Sum_probs=110.8
Q ss_pred HHHHHHHHHHHHHCCCCHHHCEEEEECCCCCHHHHHH-HHHCCCCCCCCCCCHHHHHHH-HCCCCCCCCCEEEECCCCCC
Q ss_conf 9999999999998198964418998718999999999-997298100012100011110-00001258730230244320
Q gi|254780801|r 8 QVFKQKIENSAILAKRPKDSVSLVAVSKMVDSKKIRV-ALSCGQVIFAENKLQEAKKKW-IPLRKEWDVQLRFIGSLQSN 85 (222)
Q Consensus 8 ~~i~~~I~~a~~~~gR~~~~v~LiaVtK~~~~e~I~~-~~~~G~~~fGENrvQE~~~K~-~~l~~~~~i~wHfIG~LQsN 85 (222)
+.|++++++.......- ...+.-..|.-|...|.. +.+.|. -|-=.-..|+..-. ..++ .-+-.|-|+..+.
T Consensus 60 ~~i~~~~~~l~~a~~~~--~~~i~YAvKaN~~~~vl~~l~~~G~-G~Dv~S~~El~~al~aG~~---~~~Iv~~g~~K~~ 133 (441)
T 3n2b_A 60 ATLERHWHAFDKSVGDY--PHLICYAVKANSNLGVLNTLARLGS-GFDIVSVGELERVLAAGGD---PSKVVFSGVGKTE 133 (441)
T ss_dssp HHHHHHHHHHHHHTTTS--CEEEEEEGGGCCCHHHHHHHHHTTC-EEEESSHHHHHHHHHTTCC---GGGEEECCTTCCH
T ss_pred HHHHHHHHHHHHHHHCC--CCEEEEEECCCCCHHHHHHHHHHCC-EEEEECHHHHHHHHHCCCC---CCCEEECCCCCCH
T ss_conf 99999999999876058--9989999613898999999998399-3898699999999973999---2104862667988
Q ss_pred HHHHHCCCCH-HCCCCCCCCHHHHHHHHHHHHCCCEEEEEEEECC------------CCCCCCCCCCCHHHHHHHHHHCC
Q ss_conf 0132011100-0012222200134433333311430368897004------------66563465700012223443104
Q gi|254780801|r 86 KVSEIVSLFD-VIETVSREKTASLLSLEMIKQSRFLPVYIQVNTG------------YEIQKSGIMPNQTKDFVILCRQK 152 (222)
Q Consensus 86 Kvk~i~~~~~-~Ihsvds~~~a~~L~~~~~~~~~~~~vliQVN~~------------~e~~K~G~~p~el~~l~~~i~~~ 152 (222)
.--...-... .+-.+||....++|...+.+.++..+|+|.||.+ +..+|+|+..+++..++..+...
T Consensus 134 ~~l~~ai~~gi~~i~ids~~El~~i~~~a~~~~~~~~v~lRinp~~~~~~~~~~~~~~~~skfGi~~~~~~~~~~~~~~~ 213 (441)
T 3n2b_A 134 AEMKRALQLKIKCFNVESEPELQRLNKVAGELGVKAPISLRINPDVDAKTHPYISTGLRDNKFGITFDRAAQVYRLAHSL 213 (441)
T ss_dssp HHHHHHHHTTCSEEEECSHHHHHHHHHHHHHHTCCEEEEEEBCCCCCTTTCHHHHHHHHTSSSSBCGGGHHHHHHHHHHC
T ss_pred HHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCC
T ss_conf 99999986244543443077999999888861999769999925888666634156877676676578899999975104
Q ss_pred CCCCHHHHEE-CCCCCCCCH---HHHHHHHHHHHHC-----CCCEECCC
Q ss_conf 3110011101-154334520---5899999998875-----89472247
Q gi|254780801|r 153 YQLNVEGLMC-IPPAMGNPK---PHFYLLSEIAREC-----KLTKLSMG 192 (222)
Q Consensus 153 ~~L~i~GLMt-i~p~~~d~~---~~F~~l~~l~~~~-----~~~~LSmG 192 (222)
++|++.||=+ ++....++. .....+.++.+.+ .+..|.+|
T Consensus 214 ~~l~l~Glh~HiGSq~~~~~~~~~a~~~~~~~~~~l~~~g~~~~~ldiG 262 (441)
T 3n2b_A 214 PNLDVHGIDCHIGSQLTALAPFIDATDRLLALIDSLKAEGIHIRHLDVG 262 (441)
T ss_dssp TTEEEEEEECCTTCSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCEEECC
T ss_pred CCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEC
T ss_conf 6826999995168763453899999999999999999709970046633