Query gi|254780801|ref|YP_003065214.1| hypothetical protein CLIBASIA_03460 [Candidatus Liberibacter asiaticus str. psy62] Match_columns 222 No_of_seqs 125 out of 3258 Neff 5.9 Searched_HMMs 13730 Date Wed Jun 1 08:12:00 2011 Command /home/congqian_1/programs/hhpred/hhsearch -i 254780801.hhm -d /home/congqian_1/database/scop/scop70_1_75.hhm No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM 1 d1ct5a_ c.1.6.2 (A:) "Hypothet 100.0 0 0 517.4 16.0 212 3-216 13-244 (244) 2 d1vfsa2 c.1.6.1 (A:13-249) Ala 99.6 1E-14 7.5E-19 117.2 11.6 205 7-221 2-224 (237) 3 d1bd0a2 c.1.6.1 (A:12-244) Ala 99.5 4.5E-14 3.2E-18 113.0 12.2 202 3-221 6-220 (233) 4 d1rcqa2 c.1.6.1 (A:8-233) Alan 99.5 2.7E-13 2E-17 107.7 11.3 187 27-221 18-213 (226) 5 d1twia2 c.1.6.1 (A:50-313) Dia 97.7 0.00098 7.1E-08 43.4 13.1 183 3-192 5-213 (264) 6 d1hkva2 c.1.6.1 (A:46-310) Dia 97.6 0.00037 2.7E-08 46.2 10.2 177 8-192 3-211 (265) 7 d1f3ta2 c.1.6.1 (A:44-283) Euk 96.9 0.0076 5.6E-07 37.4 10.2 152 7-171 2-163 (240) 8 d7odca2 c.1.6.1 (A:44-283) Euk 96.0 0.04 2.9E-06 32.6 9.5 152 7-171 2-163 (240) 9 d1knwa2 c.1.6.1 (A:32-278) Dia 95.9 0.07 5.1E-06 30.9 10.5 171 7-192 2-194 (247) 10 d1rpxa_ c.1.2.2 (A:) D-ribulos 87.3 0.65 4.7E-05 24.4 5.5 68 152-219 138-215 (230) 11 d1q6oa_ c.1.2.3 (A:) 3-keto-L- 83.9 0.45 3.3E-05 25.4 3.4 154 52-220 39-198 (213) 12 d1tqja_ c.1.2.2 (A:) D-ribulos 83.1 1.1 8.3E-05 22.7 5.2 68 153-220 131-208 (221) 13 d2flia1 c.1.2.2 (A:3-219) D-ri 82.2 1.1 7.9E-05 22.9 4.8 69 152-220 127-205 (217) 14 d1eixa_ c.1.2.3 (A:) Orotidine 77.0 2.1 0.00015 21.0 4.8 156 53-219 42-218 (231) 15 d1h1ya_ c.1.2.2 (A:) D-ribulos 74.9 2.8 0.0002 20.1 8.0 74 146-219 125-204 (220) 16 d1vqta1 c.1.2.3 (A:1-198) Orot 59.6 3.9 0.00029 19.1 3.3 140 54-218 35-187 (198) 17 d1tqxa_ c.1.2.2 (A:) D-ribulos 57.1 6.1 0.00044 17.8 6.6 67 153-219 134-206 (221) 18 d1to3a_ c.1.10.1 (A:) Putative 50.9 7.6 0.00056 17.2 8.2 109 104-217 140-258 (291) 19 d1dbta_ c.1.2.3 (A:) Orotidine 47.8 3.9 0.00028 19.2 1.7 155 52-219 41-222 (237) 20 d2b0ja2 c.2.1.6 (A:1-242) 5,10 32.7 14 0.0011 15.3 8.0 141 36-185 78-235 (242) 21 d2czda1 c.1.2.3 (A:1-206) Orot 30.6 16 0.0011 15.1 3.0 148 53-219 38-193 (206) 22 d1y0ea_ c.1.2.5 (A:) Putative 27.1 18 0.0013 14.7 8.0 47 171-219 161-210 (222) 23 d1jw9b_ c.111.1.1 (B:) Molybde 25.3 13 0.00091 15.7 1.3 71 48-120 76-148 (247) 24 d1eepa_ c.1.5.1 (A:) Inosine m 24.8 20 0.0014 14.4 2.8 50 171-220 237-292 (388) 25 d1yova1 c.111.1.2 (A:6-534) Am 23.9 20 0.0015 14.3 3.1 91 26-120 50-145 (529) 26 d1o08a_ c.108.1.6 (A:) beta-Ph 23.7 21 0.0015 14.3 3.0 37 177-213 151-191 (221) 27 d1km4a_ c.1.2.3 (A:) Orotidine 23.6 21 0.0015 14.3 3.0 152 53-219 41-200 (212) 28 d1c0aa1 b.40.4.1 (A:1-106) Asp 23.1 12 0.00089 15.8 0.9 76 75-163 2-77 (106) 29 d1ps9a1 c.1.4.1 (A:1-330) 2,4- 21.5 23 0.0017 14.0 6.3 102 114-216 203-315 (330) 30 d1yxya1 c.1.2.5 (A:4-233) Puta 21.3 18 0.0013 14.6 1.5 42 177-220 175-219 (230) 31 d1juba_ c.1.4.1 (A:) Dihydroor 20.8 23 0.0017 13.9 5.0 44 174-217 229-279 (311) No 1 >d1ct5a_ c.1.6.2 (A:) "Hypothetical" protein ybl036c {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Probab=100.00 E-value=0 Score=517.41 Aligned_cols=212 Identities=29% Similarity=0.369 Sum_probs=194.1 Q ss_pred HHHHHHHHHHHHHHHHHH--CCCCHHHCEEEEECCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCCCCEEEEC Q ss_conf 899999999999999998--198964418998718999999999997298100012100011110000012587302302 Q gi|254780801|r 3 LGNKLQVFKQKIENSAIL--AKRPKDSVSLVAVSKMVDSKKIRVALSCGQVIFAENKLQEAKKKWIPLRKEWDVQLRFIG 80 (222) Q Consensus 3 i~~nl~~i~~~I~~a~~~--~gR~~~~v~LiaVtK~~~~e~I~~~~~~G~~~fGENrvQE~~~K~~~l~~~~~i~wHfIG 80 (222) |..||+.|+++|+.+|+. +||+|.+|+|||||||+|+++|+.+|++|+++|||||+||+.+|+..+++ +++||||| T Consensus 13 i~~~~~~i~~~I~~~~~~~~~~r~~~~V~LiaVsK~~~~~~I~~~~~~G~~~fGENrvQE~~~K~~~l~~--~i~wHfIG 90 (244) T d1ct5a_ 13 LIAQYESVREVVNAEAKNVHVNENASKILLLVVSKLKPASDIQILYDHGVREFGENYVQELIEKAKLLPD--DIKWHFIG 90 (244) T ss_dssp HHHHHHHHHHHHHHHHHTC-------CCEEEEECTTSCHHHHHHHHHHTCCEEEECCHHHHHHHHHHSCT--TCEEEECS T ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCHHHHHHHHHCCCCHHHCCHHHHHHHHCCCCCC--CEEEEEEC T ss_conf 9999999999999998876538997866999998999999999999849861200404556542012322--01212224 Q ss_pred CCCCCHHHHHCCCC--HHCCCCCCCCHHHHHHHHHHHHCC---CEEEEEEEECCCCCCCCCCCCC-HHHHHHHHH--HCC Q ss_conf 44320013201110--000122222001344333333114---3036889700466563465700-012223443--104 Q gi|254780801|r 81 SLQSNKVSEIVSLF--DVIETVSREKTASLLSLEMIKQSR---FLPVYIQVNTGYEIQKSGIMPN-QTKDFVILC--RQK 152 (222) Q Consensus 81 ~LQsNKvk~i~~~~--~~Ihsvds~~~a~~L~~~~~~~~~---~~~vliQVN~~~e~~K~G~~p~-el~~l~~~i--~~~ 152 (222) ||||||+|++++++ |+||||||++++++|++.+.+.++ +++||||||+++|++|+||.|+ ++.++++.+ ..+ T Consensus 91 ~LQsNKvk~i~~~~~~~~I~svds~kla~~l~~~~~~~~~~~~~~~~~iQVNi~~e~~KsG~~~~~~l~~~~~~~~~~~~ 170 (244) T d1ct5a_ 91 GLQTNKCKDLAKVPNLYSVETIDSLKKAKKLNESRAKFQPDCNPILCNVQINTSHEDQKSGLNNEAEIFEVIDFFLSEEC 170 (244) T ss_dssp CCCGGGHHHHHHCTTEEEEEEECSHHHHHHHHHHHHHHCTTSCCEEEEEEBCCSSSCCSSSBCCHHHHHHHHHHHHSTTC T ss_pred CCCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHC T ss_conf 55512399999733643333100012046777887653113576226776513666666787957899999999999755 Q ss_pred CCCCHHHHEECCCCCCC-----CHHHHHHHHHHHHHCC-----CCEECCCCCHHHHHHHHHCCCEEEECHHHCC Q ss_conf 31100111011543345-----2058999999988758-----9472247773489999808988997113238 Q gi|254780801|r 153 YQLNVEGLMCIPPAMGN-----PKPHFYLLSEIARECK-----LTKLSMGMTRDFELAIASGATSVRIGSGIFG 216 (222) Q Consensus 153 ~~L~i~GLMti~p~~~d-----~~~~F~~l~~l~~~~~-----~~~LSmGMS~D~~~Ai~~Gst~vRiGs~iFG 216 (222) ++|+++|||||||...+ ++.+|..++++++++. ..+||||||+||++||++|||||||||+||| T Consensus 171 ~~l~l~GLM~i~p~~~~~~~~~~~~~F~~l~~l~~~l~~~~~~~~~LSMGMS~Dye~AI~~GsT~VRIGs~iFG 244 (244) T d1ct5a_ 171 KYIKLNGLMTIGSWNVSHEDSKENRDFATLVEWKKKIDAKFGTSLKLSMGMSADFREAIRQGTAEVRIGTDIFG 244 (244) T ss_dssp CSEEEEEEECCCCCC---------HHHHHHHHHHHHHHHHHCCCCEEECCCTTTHHHHHHTTCSEEEESHHHHC T ss_pred CCCHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECHHHHHHHHHHHCCCCEEECCCHHCC T ss_conf 62102054333467888034578899999999999983537997977175454699999879997984723109 No 2 >d1vfsa2 c.1.6.1 (A:13-249) Alanine racemase {Streptomyces lavendulae [TaxId: 1914]} Probab=99.58 E-value=1e-14 Score=117.22 Aligned_cols=205 Identities=15% Similarity=0.129 Sum_probs=141.7 Q ss_pred HHHHHHHHHHHHHHCCCCHHHCEEEEECCC----CCHHHH-HHHHHCCCCCCCCCCCHHHHHHHHCCCCCCCCCEEEECC Q ss_conf 999999999999981989644189987189----999999-999972981000121000111100000125873023024 Q gi|254780801|r 7 LQVFKQKIENSAILAKRPKDSVSLVAVSKM----VDSKKI-RVALSCGQVIFAENKLQEAKKKWIPLRKEWDVQLRFIGS 81 (222) Q Consensus 7 l~~i~~~I~~a~~~~gR~~~~v~LiaVtK~----~~~e~I-~~~~~~G~~~fGENrvQE~~~K~~~l~~~~~i~wHfIG~ 81 (222) |+.++.+++...+++ + ..+++||.|. +....| +.+.++|++.||-..++|+.+-...-.+. ..-..|. T Consensus 2 L~al~~N~~~l~~~~---~-~~~i~aVVKAnAYGhG~~~ia~~l~~~g~~~f~Va~~~EA~~lR~~g~~~---~Il~l~~ 74 (237) T d1vfsa2 2 LDAVRANVRALRARA---P-RSALMAVVKSNAYGHGAVPCARAAQEAGAAWLGTATPEEALELRAAGIQG---RIMCWLW 74 (237) T ss_dssp HHHHHHHHHHHHTTS---T-TSEEEEECHHHHHTTCHHHHHHHHHHHTCCEEEESSHHHHHHHHHTTCCS---EEEECCC T ss_pred HHHHHHHHHHHHHHC---C-CCEEEEEEEECCCCCCHHHHHHHHHHCCCCEEEEEECCHHHHHHHHCCCC---CEEECCC T ss_conf 799999999999768---9-98299998131574779999999998699989874003488998704689---7200258 Q ss_pred CCCCHHHHHCCCCHHCCCCCCCCHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCHHHHHHHH---HHCCCCCCHH Q ss_conf 4320013201110000122222001344333333114303688970046656346570001222344---3104311001 Q gi|254780801|r 82 LQSNKVSEIVSLFDVIETVSREKTASLLSLEMIKQSRFLPVYIQVNTGYEIQKSGIMPNQTKDFVIL---CRQKYQLNVE 158 (222) Q Consensus 82 LQsNKvk~i~~~~~~Ihsvds~~~a~~L~~~~~~~~~~~~vliQVN~~~e~~K~G~~p~el~~l~~~---i~~~~~L~i~ 158 (222) +-..-+..++. .++..+|++...++.+...+.+.+++.+|.|+||+| .+|.||.|+|+.++++. +...++|++. T Consensus 75 ~~~~~~~~~~~-~~i~~~i~s~~~l~~l~~~a~~~~~~~~vhLkiDTG--M~RlG~~~~e~~~l~~~~~~~~~~~~l~~~ 151 (237) T d1vfsa2 75 TPGGPWREAIE-TDIDVSVSGMWALDEVRAAARAAGRTARIQLKADTG--LGRNGCQPADWAELVGAAVAAQAEGTVQVT 151 (237) T ss_dssp CTTCCHHHHHH-TTCEEEECSHHHHHHHHHHHHHHTSCEEEEEEBCSS--CCSSSBCHHHHHHHHHHHHHHHHTTSEEEE T ss_pred CCHHHHHHHHH-HCCCCEECCHHHHHHHHHHHHHCCCCEEEEEEECCC--CCCCCCCHHHHHHHHHHHHHHHCCCCEEEE T ss_conf 87278999997-234524341988999999999659972699985588--777788835789999998865306863265 Q ss_pred HHEECCCCCCCCH-----HHHHHHHHH---HHHC--CCCEECCCCCHHHHHHHHHCCCEEEECHHHCCCCCCC Q ss_conf 1101154334520-----589999999---8875--8947224777348999980898899711323899999 Q gi|254780801|r 159 GLMCIPPAMGNPK-----PHFYLLSEI---AREC--KLTKLSMGMTRDFELAIASGATSVRIGSGIFGERPCQ 221 (222) Q Consensus 159 GLMti~p~~~d~~-----~~F~~l~~l---~~~~--~~~~LSmGMS~D~~~Ai~~Gst~vRiGs~iFG~R~~~ 221 (222) |+||==+..+++. .++..+.++ ..+. .....|++.|.-.-..=+.--+|||+|-+|||--|.+ T Consensus 152 Gi~TH~a~ad~~~~~~~~~Q~~~F~~~~~~l~~~~~~~~~~h~aNS~~~~~~~~~~~d~vR~Gi~lYG~~P~~ 224 (237) T d1vfsa2 152 GVWSHFACADEPGHPSIRLQLDAFRDMLAYAEKEGVDPEVRHIANSPATLTLPETHFDLVRTGLAVYGVSPSP 224 (237) T ss_dssp EEECCCSSTTSTTCHHHHHHHHHHHHHHHHHHHTTCCCSEEEEECHHHHHHCGGGCSSEEEECGGGGTCCSCG T ss_pred EEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCHHHHCCCCCCCCEECCCHHHCCCCCCC T ss_conf 5651202453112266899999999999999971899985895188999849976798767085005889787 No 3 >d1bd0a2 c.1.6.1 (A:12-244) Alanine racemase {Bacillus stearothermophilus [TaxId: 1422]} Probab=99.55 E-value=4.5e-14 Score=112.96 Aligned_cols=202 Identities=15% Similarity=0.138 Sum_probs=143.1 Q ss_pred HHHHHHHHHHHHHHHHHHCCCCHHHCEEEEECCC----CCHHHHHH-HHHCCCCCCCCCCCHHHHHHHHCCCCCCCCCEE Q ss_conf 8999999999999999981989644189987189----99999999-997298100012100011110000012587302 Q gi|254780801|r 3 LGNKLQVFKQKIENSAILAKRPKDSVSLVAVSKM----VDSKKIRV-ALSCGQVIFAENKLQEAKKKWIPLRKEWDVQLR 77 (222) Q Consensus 3 i~~nl~~i~~~I~~a~~~~gR~~~~v~LiaVtK~----~~~e~I~~-~~~~G~~~fGENrvQE~~~K~~~l~~~~~i~wH 77 (222) |+.|++.+++.+ ++..+++||.|. +....|.. ++++|++.||--+++|+..-...-. +...- T Consensus 6 l~~N~~~ir~~~----------~~~~~i~aVVKAnAYGhG~~~ia~~l~~~G~~~f~Va~i~EA~~LR~~g~---~~~Il 72 (233) T d1bd0a2 6 IYDNVENLRRLL----------PDDTHIMAVVKANAYGHGDVQVARTALEAGASRLAVAFLDEALALREKGI---EAPIL 72 (233) T ss_dssp HHHHHHHHHHHS----------CTTCEEEEECHHHHHTTCHHHHHHHHHHHTCCEEEESSHHHHHHHHHTTC---CSCEE T ss_pred HHHHHHHHHHHC----------CCCCEEEEEEEECCCCCCHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHCC---CCEEE T ss_conf 999999999848----------99896999972234758779999999965767431653020899998277---64473 Q ss_pred EECCCCCCHHHHHCCCCHHCCCCCCCCHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCH-HHHHHHHHHCCCCCC Q ss_conf 3024432001320111000012222200134433333311430368897004665634657000-122234431043110 Q gi|254780801|r 78 FIGSLQSNKVSEIVSLFDVIETVSREKTASLLSLEMIKQSRFLPVYIQVNTGYEIQKSGIMPNQ-TKDFVILCRQKYQLN 156 (222) Q Consensus 78 fIG~LQsNKvk~i~~~~~~Ihsvds~~~a~~L~~~~~~~~~~~~vliQVN~~~e~~K~G~~p~e-l~~l~~~i~~~~~L~ 156 (222) ..|.........++. .+.+.+|.+...++.++.. .+.+++.+|.|+|||| .+|.||.+++ +..++..+...+++. T Consensus 73 vl~~~~~~~~~~~~~-~~i~~~v~~~~~~~~~~~~-~~~~~~~~vhLkvDTG--M~RlG~~~~e~~~~~~~~~~~~~~l~ 148 (233) T d1bd0a2 73 VLGASRPADAALAAQ-QRIALTVFRSDWLEEASAL-YSGPFPIHFHLKMDTG--MGRLGVKDEEETKRIVALIERHPHFV 148 (233) T ss_dssp ECSCCCGGGHHHHHH-TTEEEEECCHHHHHHHHHH-CCCSSCEEEEEEBCSS--SCSSSBCSHHHHHHHHHHHHHSTTEE T ss_pred ECCCCCCHHHHHHHH-CCCCCEEEHHHHHHHHHHH-HCCCCCEEEEEEECCC--CCCCCCCHHHHHHHHHHHHHCCCCCC T ss_conf 126876077887654-1464234369986556652-0357524789986256--66678984898999999985066642 Q ss_pred HHHHEECCCCCCCC-----HHHHHHHHHHHHHCC--CCEECCCCCHHHHHHHHHCCCEEEECHHHCCCCCCC Q ss_conf 01110115433452-----058999999988758--947224777348999980898899711323899999 Q gi|254780801|r 157 VEGLMCIPPAMGNP-----KPHFYLLSEIARECK--LTKLSMGMTRDFELAIASGATSVRIGSGIFGERPCQ 221 (222) Q Consensus 157 i~GLMti~p~~~d~-----~~~F~~l~~l~~~~~--~~~LSmGMS~D~~~Ai~~Gst~vRiGs~iFG~R~~~ 221 (222) +.|+||==+..+++ ..+|..+.++.+.++ ...+|+.-|.-.-.--+..-+|||.|-+|||--|.+ T Consensus 149 i~Gi~THla~ad~~~~~~~~~q~~~f~~~~~~l~~~~~~~h~anSaa~l~~~~~~~d~vR~Gi~lYG~~p~~ 220 (233) T d1bd0a2 149 LEGLYTHFATADEVNTDYFSYQYTRFLHMLEWLPSRPPLVHCANSAASLRFPDRTFNMVRFGIAMYGLAPSP 220 (233) T ss_dssp EEEEECCCSSTTSSCCHHHHHHHHHHHHHHTTCSSCCSEEECCCHHHHHHCTTSCTTEEEECGGGGTCCSCG T ss_pred HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEECCCHHHHCCCCCCCCEECCCCEEECCCCCC T ss_conf 466531204777522047899999999999863265630400141998569855697877294207879888 No 4 >d1rcqa2 c.1.6.1 (A:8-233) Alanine racemase {Pseudomonas aeruginosa [TaxId: 287]} Probab=99.47 E-value=2.7e-13 Score=107.71 Aligned_cols=187 Identities=16% Similarity=0.141 Sum_probs=129.0 Q ss_pred HCEEEEECCC----CCHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCCCCEEEECCCCCCHHHHHCCCCHHCCCCCC Q ss_conf 4189987189----999999999972981000121000111100000125873023024432001320111000012222 Q gi|254780801|r 27 SVSLVAVSKM----VDSKKIRVALSCGQVIFAENKLQEAKKKWIPLRKEWDVQLRFIGSLQSNKVSEIVSLFDVIETVSR 102 (222) Q Consensus 27 ~v~LiaVtK~----~~~e~I~~~~~~G~~~fGENrvQE~~~K~~~l~~~~~i~wHfIG~LQsNKvk~i~~~~~~Ihsvds 102 (222) ..+++||.|- +....|..+++.|++.||-..++|+.+-....... +| +=|-|.....-...++. .+.+-++.+ T Consensus 18 ~~~i~aVVKanAYGhG~~~va~~l~~g~~~faVa~~~Ea~~LR~~g~~~-~I-lvl~~~~~~~~~~~~~~-~~i~~~i~~ 94 (226) T d1rcqa2 18 GARALAVIKADAYGHGAVRCAEALAAEADGFAVACIEEGLELREAGIRQ-PI-LLLEGFFEASELELIVA-HDFWCVVHC 94 (226) T ss_dssp CSEEEEECHHHHHTTCHHHHHHHHTTTCSEEEESSHHHHHHHHHTTCCS-CE-EETTCCSSGGGHHHHHH-TTEEEEECS T ss_pred CCCEEEEEEECCCCCCHHHHHHHHHHCCCHHHHHHHCCHHHHHHCCCCC-CE-EEECCCCCHHHHHHHHH-CCCCCEECC T ss_conf 9959999813356175999999999666611355410089999729998-55-87114687789999985-166615442 Q ss_pred CCHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHEECCCCCCCC-----HHHHHHH Q ss_conf 20013443333331143036889700466563465700012223443104311001110115433452-----0589999 Q gi|254780801|r 103 EKTASLLSLEMIKQSRFLPVYIQVNTGYEIQKSGIMPNQTKDFVILCRQKYQLNVEGLMCIPPAMGNP-----KPHFYLL 177 (222) Q Consensus 103 ~~~a~~L~~~~~~~~~~~~vliQVN~~~e~~K~G~~p~el~~l~~~i~~~~~L~i~GLMti~p~~~d~-----~~~F~~l 177 (222) ...++.+... ..+++.+|.|+|+|| .+|.||.++|+.+++..+..++++++.|+||--+..+++ +.+...+ T Consensus 95 ~~~~~~~~~~--~~~~~~~vhlkiDTG--M~RlG~~~~e~~~~~~~~~~~~~l~~~gi~tHfa~ad~~~~~~~~~Q~~~F 170 (226) T d1rcqa2 95 AWQLEAIERA--SLARPLNVWLKMDSG--MHRVGFFPEDFRAAHERLRASGKVAKIVMMSHFSRADELDCPRTEEQLAAF 170 (226) T ss_dssp HHHHHHHHHC--CCSSCEEEEEEBCSS--SCSSSBCHHHHHHHHHHHHHTTCEEEEEEECCCSSTTCTTCTHHHHHHHHH T ss_pred HHHHHHHHHH--HHCCCEEEEEEEECC--CCCCCCCHHHHHHHHHHHHCCCCCCCEECCCCCCCCCCCHHHHHHHHHHHH T ss_conf 9999999997--412522689998346--432466858888888876413443300003543565410116899888999 Q ss_pred HHHHHHCCCCEECCCCCHHHHHHHHHCCCEEEECHHHCCCCCCC Q ss_conf 99988758947224777348999980898899711323899999 Q gi|254780801|r 178 SEIARECKLTKLSMGMTRDFELAIASGATSVRIGSGIFGERPCQ 221 (222) Q Consensus 178 ~~l~~~~~~~~LSmGMS~D~~~Ai~~Gst~vRiGs~iFG~R~~~ 221 (222) .++.+.+.. .+|+--|.-.-..=+..-+|||+|.++||--|.. T Consensus 171 ~~~~~~~~~-~~h~aNSaa~l~~~~~~~d~vR~Gi~lYG~~P~~ 213 (226) T d1rcqa2 171 SAASQGLEG-EISLRNSPAVLGWPKVPSDWVRPGILLYGATPFE 213 (226) T ss_dssp HHHHTTCCS-CEECCCHHHHHHCTTSCCSEECCCGGGGTCCSSS T ss_pred HHHHHCCCC-CCCCCCCHHHHCCCCCCCCEECCCCEEECCCCCC T ss_conf 999851123-5210377998779977898876082115839687 No 5 >d1twia2 c.1.6.1 (A:50-313) Diaminopimelate decarboxylase LysA {Archaeon Methanococcus jannaschii [TaxId: 2190]} Probab=97.68 E-value=0.00098 Score=43.39 Aligned_cols=183 Identities=11% Similarity=0.056 Sum_probs=117.2 Q ss_pred HHHHHHHHHHHHHHHHHHCCCCHHHCEEEEECCCCCHHHHHH-HHHCCCCCCCCCCCHHHHHHHH-CCCCCCCCCEEEEC Q ss_conf 899999999999999998198964418998718999999999-9972981000121000111100-00012587302302 Q gi|254780801|r 3 LGNKLQVFKQKIENSAILAKRPKDSVSLVAVSKMVDSKKIRV-ALSCGQVIFAENKLQEAKKKWI-PLRKEWDVQLRFIG 80 (222) Q Consensus 3 i~~nl~~i~~~I~~a~~~~gR~~~~v~LiaVtK~~~~e~I~~-~~~~G~~~fGENrvQE~~~K~~-~l~~~~~i~wHfIG 80 (222) |++|+..+++..+......|. ++.+.=..|.-|...|.. +.+.|. .|==.-..|+.--.. .++ +-+..|-| T Consensus 5 i~~n~~~~~~af~~~~~~~g~---~~~i~YAvKaN~~~~vl~~l~~~G~-g~Dv~S~~El~~al~~G~~---~~~I~~~g 77 (264) T d1twia2 5 IKINYNRYIEAFKRWEEETGK---EFIVAYAYKANANLAITRLLAKLGC-GADVVSGGELYIAKLSNVP---SKKIVFNG 77 (264) T ss_dssp HHHHHHHHHHHHHHHHHHHSC---CEEEEEEGGGCCCHHHHHHHHHTTC-EEEECSHHHHHHHHHTTCC---GGGEEECC T ss_pred HHHHHHHHHHHHHHHHHHCCC---CEEEEEEECCCCCHHHHHHHHHCCC-CEEEECCCHHHHHHHCCCC---CCCCCCCC T ss_conf 999999999999998885199---6699988456898999999998299-8056251489887641797---43344678 Q ss_pred CCCCCHH-HHHCCCCHHCCCCCCCCHHHHHHHHHHHHCCCEEEEEEEECC------------CCCCCCCCCCCHHHHHHH Q ss_conf 4432001-320111000012222200134433333311430368897004------------665634657000122234 Q gi|254780801|r 81 SLQSNKV-SEIVSLFDVIETVSREKTASLLSLEMIKQSRFLPVYIQVNTG------------YEIQKSGIMPNQTKDFVI 147 (222) Q Consensus 81 ~LQsNKv-k~i~~~~~~Ihsvds~~~a~~L~~~~~~~~~~~~vliQVN~~------------~e~~K~G~~p~el~~l~~ 147 (222) +.-+... +.++..--..-++|+......+.+.+.+.+....+.+-+|.+ +..+|+|+.+++...+.. T Consensus 78 p~k~~~~i~~a~~~gv~~~~~ds~~el~~i~~~a~~~~~~~~v~~Ri~~~~~~~~~~~~~~~~~~skfG~~~~~~~~~~~ 157 (264) T d1twia2 78 NCKTKEEIIMGIEANIRAFNVDSISELILINETAKELGETANVAFRINPNVNPKTHPKISTGLKKNKFGLDVESGIAMKA 157 (264) T ss_dssp SSCCHHHHHHHHHTTCSEEEECSHHHHHHHHHHHHHHTCCEEEEEEEECCCCTTTCHHHHHHHHHSSCSEESTTSHHHHH T ss_pred CHHHHHHHHHHHCCEEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH T ss_conf 54678888774323121000010578888888898709983211022457774445430145533456662777788999 Q ss_pred --HHHCCCCCCHHHHEE-CCCCCCCCHHH---HHHHHHHHHH-----CCCCEECCC Q ss_conf --431043110011101-15433452058---9999999887-----589472247 Q gi|254780801|r 148 --LCRQKYQLNVEGLMC-IPPAMGNPKPH---FYLLSEIARE-----CKLTKLSMG 192 (222) Q Consensus 148 --~i~~~~~L~i~GLMt-i~p~~~d~~~~---F~~l~~l~~~-----~~~~~LSmG 192 (222) ...+.++|++.||=+ ++....|+... ...+.++.++ ..+..|.+| T Consensus 158 ~~~~~~~~~l~~~GlH~H~gS~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~ldiG 213 (264) T d1twia2 158 IKMALEMEYVNVVGVHCHIGSQLTDISPFIEETRKVMDFVVELKEEGIEIEDVNLG 213 (264) T ss_dssp HHHHHHCSSEEEEEEECCCCSSBCCSHHHHHHHHHHHHHHHHHHHTTCCCSEEECC T ss_pred HHHHHHHCCCCCCCCEEEEHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEC T ss_conf 99998731344344023201023442668999999999999999839986577613 No 6 >d1hkva2 c.1.6.1 (A:46-310) Diaminopimelate decarboxylase LysA {Mycobacterium tuberculosis [TaxId: 1773]} Probab=97.62 E-value=0.00037 Score=46.23 Aligned_cols=177 Identities=15% Similarity=0.115 Sum_probs=112.8 Q ss_pred HHHHHHHHHHHHHCCCCHHHCEEEEECCCCCHHH-HHHHHHCCCCCCCCCCCHHHHHH-HHCCCCCCCCCEEEECCCCCC Q ss_conf 9999999999998198964418998718999999-99999729810001210001111-000001258730230244320 Q gi|254780801|r 8 QVFKQKIENSAILAKRPKDSVSLVAVSKMVDSKK-IRVALSCGQVIFAENKLQEAKKK-WIPLRKEWDVQLRFIGSLQSN 85 (222) Q Consensus 8 ~~i~~~I~~a~~~~gR~~~~v~LiaVtK~~~~e~-I~~~~~~G~~~fGENrvQE~~~K-~~~l~~~~~i~wHfIG~LQsN 85 (222) +.+++++++.....+ ..+++.-..|..|... ++.+.+.|. .|==--..|+..- ...++ +-+..|-|+.-+. T Consensus 3 ~~lr~~~~~~~~af~---~~~~i~YA~KaN~~~~vl~~l~~~G~-g~dvaS~~El~~al~~G~~---~~~Ii~~gp~K~~ 75 (265) T d1hkva2 3 DDFRSRCRETAAAFG---SGANVHYAAKAFLCSEVARWISEEGL-CLDVCTGGELAVALHASFP---PERITLHGNNKSV 75 (265) T ss_dssp HHHHHHHHHHHHHTT---SGGGBEEEGGGSCCHHHHHHHHHHTC-EEEECSHHHHHHHHHTTCC---GGGEEECCSSCCH T ss_pred HHHHHHHHHHHHHCC---CCCEEEEEECCCCCHHHHHHHHHCCC-CEEEECHHHHHHHHHCCCC---HHHHEECCCCCHH T ss_conf 999999999998569---99869988633899999999997499-7598675159999982899---8992335521003 Q ss_pred H-HHHHCCC-CHHCCCCCCCCHHHHHHHHHHHHCCCEEEEEEEEC------------CCCCCCCCCCCCHHHHH--HHHH Q ss_conf 0-1320111-00001222220013443333331143036889700------------46656346570001222--3443 Q gi|254780801|r 86 K-VSEIVSL-FDVIETVSREKTASLLSLEMIKQSRFLPVYIQVNT------------GYEIQKSGIMPNQTKDF--VILC 149 (222) Q Consensus 86 K-vk~i~~~-~~~Ihsvds~~~a~~L~~~~~~~~~~~~vliQVN~------------~~e~~K~G~~p~el~~l--~~~i 149 (222) . ++.++.. ..+| ++||+...++|.+.+.+.+...+|.+.+|. ++..+|+|+.+++...+ +..+ T Consensus 76 ~~l~~Al~~gv~~i-~vDs~~El~~i~~~~~~~~~~~~v~lr~~p~~~~~~~~~~~~g~~~skFG~~~~~~~~~~~~~~~ 154 (265) T d1hkva2 76 SELTAAVKAGVGHI-VVDSMTEIERLDAIAGEAGIVQDVLVRLTVGVEAHTHEFISTAHEDQKFGLSVASGAAMAAVRRV 154 (265) T ss_dssp HHHHHHHHHTCCCE-EECSHHHHHHHHHHHHHHTCCEEEEEEEECSEEEEETEEEECSSCCSSSSEESTTSHHHHHHHHH T ss_pred HHHHHHHHCCCCCC-CCCCHHHHHHHHHHHHHCCCCCCCCCCCCCEECCCCCCCEECCCCCCCCCCCHHHHHHHHHHHHH T ss_conf 56788986385511-14542789999988652033423122333101244333110255334456523466789999999 Q ss_pred HCCCCCCHHHHEE-CCCCCCCCHH-------HHHHHHHHHHH------CCCCEECCC Q ss_conf 1043110011101-1543345205-------89999999887------589472247 Q gi|254780801|r 150 RQKYQLNVEGLMC-IPPAMGNPKP-------HFYLLSEIARE------CKLTKLSMG 192 (222) Q Consensus 150 ~~~~~L~i~GLMt-i~p~~~d~~~-------~F~~l~~l~~~------~~~~~LSmG 192 (222) ...+++++.||=. ++....++.. .+....++..+ ..+..|.+| T Consensus 155 ~~~~~l~~~GlH~HvGSq~~~~~~~~~a~~~~~~~~~~~~~~~~~~~g~~l~~ldiG 211 (265) T d1hkva2 155 FATDHLRLVGLHSHIGSQIFDVDGFELAAHRVIGLLRDVVGEFGPEKTAQIATVDLG 211 (265) T ss_dssp HHCSSEEEEEEECCCEEEECCSHHHHHHHHHHHHHHHHHHHHHHHHHSTTCCEEECC T ss_pred HHHCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEC T ss_conf 861673266655541102344588999999999887767887788608886446545 No 7 >d1f3ta2 c.1.6.1 (A:44-283) Eukaryotic ornithine decarboxylase {Trypanosoma brucei [TaxId: 5691]} Probab=96.86 E-value=0.0076 Score=37.37 Aligned_cols=152 Identities=10% Similarity=0.007 Sum_probs=95.7 Q ss_pred HHHHHHHHHHHHHHCCCCHHHCEEEEECCCCCHHHHHH-HHHCCCCCCCCCCCHHHHHHH-HCCCCCCCCCEEEECCCCC Q ss_conf 99999999999998198964418998718999999999-997298100012100011110-0000125873023024432 Q gi|254780801|r 7 LQVFKQKIENSAILAKRPKDSVSLVAVSKMVDSKKIRV-ALSCGQVIFAENKLQEAKKKW-IPLRKEWDVQLRFIGSLQS 84 (222) Q Consensus 7 l~~i~~~I~~a~~~~gR~~~~v~LiaVtK~~~~e~I~~-~~~~G~~~fGENrvQE~~~K~-~~l~~~~~i~wHfIG~LQs 84 (222) |+.|.++.++-.... +.|++.=..|.-|...|.. +.++|.- |-=.-..|+..-. ..++ .=+..|-|+.-+ T Consensus 2 l~~i~~~~~~~~~~~----p~v~~~YA~KaN~~~~il~~l~~~g~g-~dv~S~~El~~al~~G~~---~~~Iif~g~~k~ 73 (240) T d1f3ta2 2 LGDIVRKHETWKKCL----PRVTPFYAVKCNDDWRVLGTLAALGTG-FDCASNTEIQRVRGIGVP---PEKIIYANPCKQ 73 (240) T ss_dssp HHHHHHHHHHHHHHC----TTEEEEEEGGGCCCHHHHHHHHHTTCE-EEECSHHHHHHHHHTTCC---GGGEEECCSSCC T ss_pred HHHHHHHHHHHHHHC----CCCEEEEEECCCCCHHHHHHHHHCCCC-EEECCCHHHHHHHHCCCC---CCCEEECCCCCH T ss_conf 789999999999878----998798875017999999999986998-684251368999983899---642465065310 Q ss_pred CH-HHHHCCCCHHCCCCCCCCHHHHHHHHHHHHCCCEEEEEEEE------CCCCCCCCCCCCCHHHHHHHHHHCCCCCCH Q ss_conf 00-13201110000122222001344333333114303688970------046656346570001222344310431100 Q gi|254780801|r 85 NK-VSEIVSLFDVIETVSREKTASLLSLEMIKQSRFLPVYIQVN------TGYEIQKSGIMPNQTKDFVILCRQKYQLNV 157 (222) Q Consensus 85 NK-vk~i~~~~~~Ihsvds~~~a~~L~~~~~~~~~~~~vliQVN------~~~e~~K~G~~p~el~~l~~~i~~~~~L~i 157 (222) .. ++.++..-..+.++||+...++|.+.+. ..++.+-|| +++..+|+|+.++++.+++..+.+. ++++ T Consensus 74 ~~ei~~a~~~g~~~~~~ds~~el~~i~~~~~----~~~~~~ri~~~~~~~~~~~~~kFGi~~~~~~~~~~~~~~~-~~~l 148 (240) T d1f3ta2 74 ISHIRYARDSGVDVMTFDCVDELEKVAKTHP----KAKMVLRISTDDSLARCRLSVKFGAKVEDCRFILEQAKKL-NIDV 148 (240) T ss_dssp HHHHHHHHHTTCCEEEECSHHHHHHHHHHCT----TCEEEEEBCC----------CCSCBCHHHHHHHHHHHHHT-TCEE T ss_pred HHHHHHHHHHCCCCEEEEEHHHHHHHHHHCC----CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCC-CCCE T ss_conf 5779999871245324421012555555335----5564422123222245566552013378999999987333-6645 Q ss_pred HHHEE-CCCCCCCCH Q ss_conf 11101-154334520 Q gi|254780801|r 158 EGLMC-IPPAMGNPK 171 (222) Q Consensus 158 ~GLMt-i~p~~~d~~ 171 (222) .||=+ ++....++. T Consensus 149 ~GlH~H~GS~~~~~~ 163 (240) T d1f3ta2 149 TGVSFHVGSGSTDAS 163 (240) T ss_dssp EEEECCCCSCCSCTH T ss_pred EEEEEEHHHCCCCHH T ss_conf 666542222026889 No 8 >d7odca2 c.1.6.1 (A:44-283) Eukaryotic ornithine decarboxylase {Mouse (Mus musculus) [TaxId: 10090]} Probab=95.98 E-value=0.04 Score=32.56 Aligned_cols=152 Identities=13% Similarity=0.045 Sum_probs=94.6 Q ss_pred HHHHHHHHHHHHHHCCCCHHHCEEEEECCCCCHHHHHH-HHHCCCCCCCCCCCHHHHHHH-HCCCCCCCCCEEEECCCCC Q ss_conf 99999999999998198964418998718999999999-997298100012100011110-0000125873023024432 Q gi|254780801|r 7 LQVFKQKIENSAILAKRPKDSVSLVAVSKMVDSKKIRV-ALSCGQVIFAENKLQEAKKKW-IPLRKEWDVQLRFIGSLQS 84 (222) Q Consensus 7 l~~i~~~I~~a~~~~gR~~~~v~LiaVtK~~~~e~I~~-~~~~G~~~fGENrvQE~~~K~-~~l~~~~~i~wHfIG~LQs 84 (222) |+.|.++..+--+.- | .|++.=..|.-|...|.. +.+.|.- |==.-..|+..-. ..++ .=+..|-|+..+ T Consensus 2 l~~i~~~~~~~~~~~---p-~v~~~YA~KaN~~~~il~~l~~~G~g-~dv~S~~El~~a~~aG~~---~~~Iv~~g~~K~ 73 (240) T d7odca2 2 LGDILKKHLRWLKAL---P-RVTPFYAVKCNDSRAIVSTLAAIGTG-FDCASKTEIQLVQGLGVP---AERVIYANPCKQ 73 (240) T ss_dssp HHHHHHHHHHHHHHC---T-TEEEEEEGGGCCCHHHHHHHHHHTCE-EEECSHHHHHHHHHTTCC---GGGEEECCSSCC T ss_pred HHHHHHHHHHHHHHC---C-CCEEEEEECCCCCHHHHHHHHHCCCC-EEEECCHHHHHHHHCCCC---CCCEEECCCCCC T ss_conf 789999999999868---9-98798885238989999999983998-176242689999844999---430374277520 Q ss_pred C-HHHHHCCCCHHCCCCCCCCHHHHHHHHHHHHCCCEEEEEEEEC------CCCCCCCCCCCCHHHHHHHHHHCCCCCCH Q ss_conf 0-0132011100001222220013443333331143036889700------46656346570001222344310431100 Q gi|254780801|r 85 N-KVSEIVSLFDVIETVSREKTASLLSLEMIKQSRFLPVYIQVNT------GYEIQKSGIMPNQTKDFVILCRQKYQLNV 157 (222) Q Consensus 85 N-Kvk~i~~~~~~Ihsvds~~~a~~L~~~~~~~~~~~~vliQVN~------~~e~~K~G~~p~el~~l~~~i~~~~~L~i 157 (222) . =++.++..--.+..+|+....+.+.+.. ...++.+.+|+ ++..+|+|+.++++..+++.+.. .++++ T Consensus 74 ~~~l~~a~~~g~~~~~~ds~~el~~i~~~~----~~~~v~~ri~~~~~~~~~~~~~kfG~~~~~~~~~~~~~~~-~~l~l 148 (240) T d7odca2 74 VSQIKYAASNGVQMMTFDSEIELMKVARAH----PKAKLVLRIATDDSKAVCRLSVKFGATLKTSRLLLERAKE-LNIDV 148 (240) T ss_dssp HHHHHHHHHTTCCEEEECSHHHHHHHHHHC----TTCEEEEEBCC-----------CCCBCHHHHHHHHHHHHH-TTCEE T ss_pred HHHHHHHHHHHCCCCCCHHHHHHHHHHHHC----CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH-CCCEE T ss_conf 678999988633342210277889998746----6566542234455544367676653438999999998640-69468 Q ss_pred HHHEE-CCCCCCCCH Q ss_conf 11101-154334520 Q gi|254780801|r 158 EGLMC-IPPAMGNPK 171 (222) Q Consensus 158 ~GLMt-i~p~~~d~~ 171 (222) .||=+ ++....++. T Consensus 149 ~GlH~H~GSq~~~~~ 163 (240) T d7odca2 149 IGVSFHVGSGCTDPD 163 (240) T ss_dssp EEEECCCCSSCCCTH T ss_pred EEECCCCCCCCCCHH T ss_conf 761100010343288 No 9 >d1knwa2 c.1.6.1 (A:32-278) Diaminopimelate decarboxylase LysA {Escherichia coli [TaxId: 562]} Probab=95.88 E-value=0.07 Score=30.89 Aligned_cols=171 Identities=15% Similarity=0.149 Sum_probs=93.4 Q ss_pred HHHHHHHHHHHHHHCCCCHHHCEEEEECCCCCHHHHH-HHHHCCCCCCCCCCCHHHHHH-HHCCCCC-CCCCEEEECCCC Q ss_conf 9999999999999819896441899871899999999-999729810001210001111-0000012-587302302443 Q gi|254780801|r 7 LQVFKQKIENSAILAKRPKDSVSLVAVSKMVDSKKIR-VALSCGQVIFAENKLQEAKKK-WIPLRKE-WDVQLRFIGSLQ 83 (222) Q Consensus 7 l~~i~~~I~~a~~~~gR~~~~v~LiaVtK~~~~e~I~-~~~~~G~~~fGENrvQE~~~K-~~~l~~~-~~i~wHfIG~LQ 83 (222) ++.|+++++.. |..+ .+.=..|..|...|. .+.+.|. .|-=.-..|+..- ...++.. ..-+--|-|+.- T Consensus 2 ~~~ir~~~~~l-----~~~~--~v~YA~KaN~~~~vl~~l~~~G~-g~dv~S~~El~~al~~G~~~~~~~~~Ii~~g~~k 73 (247) T d1knwa2 2 AQIIRRQIAAL-----KQFD--VVRFAQKACSNIHILRLMREQGV-KVDSVSLGEIERALAAGYNPQTHPDDIVFTADVI 73 (247) T ss_dssp HHHHHHHHHTT-----TTSS--EEEEEGGGCCCHHHHHHHHHTTC-EEEECSHHHHHHHHHTTCCTTTCTTSEEEEESCC T ss_pred HHHHHHHHHHH-----CCCC--EEEEEECCCCCHHHHHHHHHCCC-CEEEECHHHHHHHHHHCCCCCCCHHHEEECCCCC T ss_conf 79999999970-----3789--89997101898999999998499-7898299999999980777556754525327731 Q ss_pred C-CHHHHHCCCCHHCCCCCCCCHHHHHHHHHHHHCCCEEEEEEEEC------------CCCCCCCCCCCCHHHHHHHHHH Q ss_conf 2-00132011100001222220013443333331143036889700------------4665634657000122234431 Q gi|254780801|r 84 S-NKVSEIVSLFDVIETVSREKTASLLSLEMIKQSRFLPVYIQVNT------------GYEIQKSGIMPNQTKDFVILCR 150 (222) Q Consensus 84 s-NKvk~i~~~~~~Ihsvds~~~a~~L~~~~~~~~~~~~vliQVN~------------~~e~~K~G~~p~el~~l~~~i~ 150 (222) + .-+++++.+--.| .+||+...++|.+.+ +..++.|.||. ++..+|+|+.++++..+++.+. T Consensus 74 ~~~~l~~a~~~~~~i-~~ds~~el~~l~~~~----~~~~i~lRinp~~~~~~~~~~~~~~~~sKFG~~~~~~~~~~~~~~ 148 (247) T d1knwa2 74 DQATLERVSELQIPV-NAGSVDMLDQLGQVS----PGHRVWLRVNPGFGHGHSQKTNTGGENSKHGIWYTDLPAALDVIQ 148 (247) T ss_dssp CHHHHHHHHHHTCCE-EESSHHHHHHHHHHS----TTCEEEEEEECSCCSSCTTSCCSSSTTCCCSEEGGGHHHHHHHHH T ss_pred HHHHHHHHHHHHHHH-CHHHHHHHHHHHHHC----CCCHHHEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH T ss_conf 046899999876330-101467899998642----311232023236444455433332222455544022245656655 Q ss_pred CCCCCCHHHHEE-CCCCCCCCHHHHHHHHHHHHH-----CCCCEECCC Q ss_conf 043110011101-154334520589999999887-----589472247 Q gi|254780801|r 151 QKYQLNVEGLMC-IPPAMGNPKPHFYLLSEIARE-----CKLTKLSMG 192 (222) Q Consensus 151 ~~~~L~i~GLMt-i~p~~~d~~~~F~~l~~l~~~-----~~~~~LSmG 192 (222) ..++++.||-+ ++....+ ...+..+..+.+. ..+..|.+| T Consensus 149 -~~~~~l~GlH~HigSq~~~-~~~~~~~~~~~~~~~~~g~~~~~ldiG 194 (247) T d1knwa2 149 -RHHLQLVGIHMHIGSGVDY-AHLEQVCGAMVRQVIEFGQDLQAISAG 194 (247) T ss_dssp -HTTCEEEEEECCCCCTTCH-HHHHHHHHHHHHHHHHHTCCCSEEECC T ss_pred -HCCCCEEEEHHCCCCCCHH-HHHHHHHHHHHHHHHHCCCCCEEEEEC T ss_conf -2155032202124765204-678999999888886305775188756 No 10 >d1rpxa_ c.1.2.2 (A:) D-ribulose-5-phosphate 3-epimerase {Potato (Solanum tuberosum) [TaxId: 4113]} Probab=87.27 E-value=0.65 Score=24.39 Aligned_cols=68 Identities=21% Similarity=0.345 Sum_probs=44.2 Q ss_pred CCCCCHHHHEECCCCCCC---CHHHHHHHHHHH---HHCCC---CEECCCCCH-HHHHHHHHCCCEEEECHHHCCCCC Q ss_conf 431100111011543345---205899999998---87589---472247773-489999808988997113238999 Q gi|254780801|r 152 KYQLNVEGLMCIPPAMGN---PKPHFYLLSEIA---RECKL---TKLSMGMTR-DFELAIASGATSVRIGSGIFGERP 219 (222) Q Consensus 152 ~~~L~i~GLMti~p~~~d---~~~~F~~l~~l~---~~~~~---~~LSmGMS~-D~~~Ai~~Gst~vRiGs~iFG~R~ 219 (222) ++.+...-+||+.|-..- ....+.+.++++ ++.+. -+.==|.+. -....++.|++.+=+||+||+.-+ T Consensus 138 l~~vD~VllM~V~PGf~GQ~f~~~~~~kI~~~~~~~~~~~~~~~I~vDGGIn~~~i~~l~~~Gad~~V~GS~if~~~d 215 (230) T d1rpxa_ 138 LDAVDLVLIMSVNPGFGGQSFIESQVKKISDLRKICAERGLNPWIEVDGGVGPKNAYKVIEAGANALVAGSAVFGAPD 215 (230) T ss_dssp TTTCSEEEEESSCTTCSSCCCCTTHHHHHHHHHHHHHHHTCCCEEEEESSCCTTTHHHHHHHTCCEEEESHHHHTSSC T ss_pred HHHCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHCCCCEEEECHHHHCCCC T ss_conf 965798999873688642001356689999987777753773489998776899999999769999998869878999 No 11 >d1q6oa_ c.1.2.3 (A:) 3-keto-L-gulonate 6-phosphate decarboxylase {Escherichia coli [TaxId: 562]} Probab=83.92 E-value=0.45 Score=25.44 Aligned_cols=154 Identities=12% Similarity=-0.047 Sum_probs=72.8 Q ss_pred CCCCCCCHHHHHHHHCCCCCCCCCEEEECCCCCCHHHHHCCCCHH--CCCCCCCCHHHHHHHHHHHHCCCEEEEEEEECC Q ss_conf 000121000111100000125873023024432001320111000--012222200134433333311430368897004 Q gi|254780801|r 52 IFAENKLQEAKKKWIPLRKEWDVQLRFIGSLQSNKVSEIVSLFDV--IETVSREKTASLLSLEMIKQSRFLPVYIQVNTG 129 (222) Q Consensus 52 ~fGENrvQE~~~K~~~l~~~~~i~wHfIG~LQsNKvk~i~~~~~~--Ihsvds~~~a~~L~~~~~~~~~~~~vliQVN~~ 129 (222) .||..-++++++......-..+...|-||....+..... .+|+ +|........+.+.+.+.+.+. .+.+..+.. T Consensus 39 ~~G~~~i~~l~~~~~~~~i~~d~k~~d~~~~~~~~~~~~--gad~vtvh~~~g~~~~~~~~~~~~~~~~--~~~v~~~~~ 114 (213) T d1q6oa_ 39 GEGVRAVRDLKALYPHKIVLADAKIADAGKILSRMCFEA--NADWVTVICCADINTAKGALDVAKEFNG--DVQIELTGY 114 (213) T ss_dssp HHCTHHHHHHHHHCTTSEEEEEEEECSCHHHHHHHHHHT--TCSEEEEETTSCHHHHHHHHHHHHHTTC--EEEEEECSC T ss_pred CCCHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHC--CCCEEEEECCCCCHHHHHHHHHHHHCCC--CEECCCCCC T ss_conf 589899999998545556046776145157888999980--9999998035781689999999997198--201265899 Q ss_pred CCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHEECCCCC---CCCHHHHHHHHHHHHHCCCCEECCCCC-HHHHHHHHHCC Q ss_conf 66563465700012223443104311001110115433---452058999999988758947224777-34899998089 Q gi|254780801|r 130 YEIQKSGIMPNQTKDFVILCRQKYQLNVEGLMCIPPAM---GNPKPHFYLLSEIARECKLTKLSMGMT-RDFELAIASGA 205 (222) Q Consensus 130 ~e~~K~G~~p~el~~l~~~i~~~~~L~i~GLMti~p~~---~d~~~~F~~l~~l~~~~~~~~LSmGMS-~D~~~Ai~~Gs 205 (222) .. .+...++...... . +...|+..+.. ..........+......-.-.-.-|.+ ++.+.|++.|+ T Consensus 115 ~~-------~~~~~~~~~~~~~--~--~~~~~~~~~g~~~~~~~~~~l~~i~~~~~~~~~i~~~gGi~~~~~~~~~~~Ga 183 (213) T d1q6oa_ 115 WT-------WEQAQQWRDAGIG--Q--VVYHRSRDAQAAGVAWGEADITAIKRLSDMGFKVTVTGGLALEDLPLFKGIPI 183 (213) T ss_dssp CC-------HHHHHHHHHTTCC--E--EEEECCHHHHHTTCCCCHHHHHHHHHHHHTTCEEEEESSCCGGGGGGGTTSCC T ss_pred CC-------HHHHHHHHHHHHH--H--HHHHHHCCCCCCCEECCHHHHHHHHHHHCCCCEEECCCCCCCCCHHHHHHCCC T ss_conf 99-------9999999986788--9--89887024685886577889999998625586183388868589999998699 Q ss_pred CEEEECHHHCCCCCC Q ss_conf 889971132389999 Q gi|254780801|r 206 TSVRIGSGIFGERPC 220 (222) Q Consensus 206 t~vRiGs~iFG~R~~ 220 (222) ..+=|||+||++.++ T Consensus 184 d~iVVGr~I~~a~dp 198 (213) T d1q6oa_ 184 HVFIAGRSIRDAASP 198 (213) T ss_dssp SEEEESHHHHTSSCH T ss_pred CEEEECHHHCCCCCH T ss_conf 999988242689999 No 12 >d1tqja_ c.1.2.2 (A:) D-ribulose-5-phosphate 3-epimerase {Synechocystis sp. PCC 6803 [TaxId: 1148]} Probab=83.14 E-value=1.1 Score=22.74 Aligned_cols=68 Identities=16% Similarity=0.263 Sum_probs=44.0 Q ss_pred CCCCHHHHEECCCCC-CC--CHHHHHHHHHHHH---HCCC---CEECCCCCHH-HHHHHHHCCCEEEECHHHCCCCCC Q ss_conf 311001110115433-45--2058999999988---7589---4722477734-899998089889971132389999 Q gi|254780801|r 153 YQLNVEGLMCIPPAM-GN--PKPHFYLLSEIAR---ECKL---TKLSMGMTRD-FELAIASGATSVRIGSGIFGERPC 220 (222) Q Consensus 153 ~~L~i~GLMti~p~~-~d--~~~~F~~l~~l~~---~~~~---~~LSmGMS~D-~~~Ai~~Gst~vRiGs~iFG~R~~ 220 (222) +.+...=+||+.|-. +. ....+.+.+++++ +.+. -+.==|.+.+ ....++.|++.+=.||+||+.-++ T Consensus 131 ~~~d~vlvM~V~pG~~GQ~f~~~~~~ki~~l~~~~~~~~~~~~I~VDGGIn~~~i~~l~~~Gad~~V~GS~if~~~d~ 208 (221) T d1tqja_ 131 PVCDLILIMSVNPGFGGQSFIPEVLPKIRALRQMCDERGLDPWIEVDGGLKPNNTWQVLEAGANAIVAGSAVFNAPNY 208 (221) T ss_dssp GGCSEEEEESSCC----CCCCGGGHHHHHHHHHHHHHHTCCCEEEEESSCCTTTTHHHHHHTCCEEEESHHHHTSSCH T ss_pred HHHCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHCCCCEEEECHHHHCCCCH T ss_conf 331189999864788874220015799999886542036533799977768898999998699999989588689999 No 13 >d2flia1 c.1.2.2 (A:3-219) D-ribulose-5-phosphate 3-epimerase {Streptococcus pyogenes [TaxId: 1314]} Probab=82.23 E-value=1.1 Score=22.90 Aligned_cols=69 Identities=17% Similarity=0.244 Sum_probs=43.1 Q ss_pred CCCCCHHHHEECCCCCCC---CHHHHHHHHHHHH---HCCCC---EECCCCCH-HHHHHHHHCCCEEEECHHHCCCCCC Q ss_conf 431100111011543345---2058999999988---75894---72247773-4899998089889971132389999 Q gi|254780801|r 152 KYQLNVEGLMCIPPAMGN---PKPHFYLLSEIAR---ECKLT---KLSMGMTR-DFELAIASGATSVRIGSGIFGERPC 220 (222) Q Consensus 152 ~~~L~i~GLMti~p~~~d---~~~~F~~l~~l~~---~~~~~---~LSmGMS~-D~~~Ai~~Gst~vRiGs~iFG~R~~ 220 (222) ++.+...=+||+.|-... ....+.+.+++++ +-+.. +..=|.+. .....++.|++.+=+||+||+.-.+ T Consensus 127 l~~id~vliM~V~pG~~Gq~f~~~~~~ki~~l~~~~~~~~~~~~I~vDGGIn~~~i~~l~~aGad~~V~Gsaif~~~d~ 205 (217) T d2flia1 127 LDLVDQVLIMTVNPGFGGQAFIPECLEKVATVAKWRDEKGLSFDIEVDGGVDNKTIRACYEAGANVFVAGSYLFKASDL 205 (217) T ss_dssp TTTCSEEEEESSCTTCSSCCCCGGGHHHHHHHHHHHHHTTCCCEEEEESSCCTTTHHHHHHHTCCEEEESHHHHTSSCH T ss_pred HHHCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHCCCCEEEECHHHHCCCCH T ss_conf 7640878999976765544210024788988888887509974899927878888999998799999974488579999 No 14 >d1eixa_ c.1.2.3 (A:) Orotidine 5'-monophosphate decarboxylase (OMP decarboxylase) {Escherichia coli [TaxId: 562]} Probab=76.97 E-value=2.1 Score=21.03 Aligned_cols=156 Identities=13% Similarity=0.185 Sum_probs=76.9 Q ss_pred CCCCCCHHHHHHHHCCCCCCCCCEEEECCC---CCCHHHHHCCCCHHCCCCCCCCHHHHHHHHHHHHCCCEEEEEEE--E Q ss_conf 001210001111000001258730230244---32001320111000012222200134433333311430368897--0 Q gi|254780801|r 53 FAENKLQEAKKKWIPLRKEWDVQLRFIGSL---QSNKVSEIVSLFDVIETVSREKTASLLSLEMIKQSRFLPVYIQV--N 127 (222) Q Consensus 53 fGENrvQE~~~K~~~l~~~~~i~wHfIG~L---QsNKvk~i~~~~~~Ihsvds~~~a~~L~~~~~~~~~~~~vliQV--N 127 (222) +|..-+.++.+. .+.=..|.++|=||+. |...+...-..+-.+|++.-....+.+.+.+.+.++...+++-| . T Consensus 42 ~G~~~i~~l~~~--~~~if~D~K~~DI~nt~~~~~~~~~~~~~~~~tvh~~~g~~~l~~~~~~~~~~~~~~~~~~~v~~~ 119 (231) T d1eixa_ 42 FGPQFVRELQQR--GFDIFLDLKFHDIPNTAAHAVAAAADLGVWMVNVHASGGARMMTAAREALVPFGKDAPLLIAVTVL 119 (231) T ss_dssp HHHHHHHHHHHT--TCCEEEEEEECSCHHHHHHHHHHHHHHTCSEEEEBGGGCHHHHHHHHHTTGGGGGGCCEEEEECSC T ss_pred CCHHHHHHHHHC--CCHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCCEEEEEEEEC T ss_conf 489999999854--825047667605857788888865316631799963672888889987664037654278997530 Q ss_pred CCCCC---CCCCCCCCHHHHHHHHHH-CCCCCCHHHHEECCCCCCCCHHHHHHHHHHHHHCCCCEECCC------CCHH- Q ss_conf 04665---634657000122234431-043110011101154334520589999999887589472247------7734- Q gi|254780801|r 128 TGYEI---QKSGIMPNQTKDFVILCR-QKYQLNVEGLMCIPPAMGNPKPHFYLLSEIARECKLTKLSMG------MTRD- 196 (222) Q Consensus 128 ~~~e~---~K~G~~p~el~~l~~~i~-~~~~L~i~GLMti~p~~~d~~~~F~~l~~l~~~~~~~~LSmG------MS~D- 196 (222) ++.+. ...|... .......... ......+.|+-+- | .+. ..++.... ..+..++=| -.+| T Consensus 120 ts~~~~~~~~~~~~~-~~~~~~~~~a~~~~~~~~~~~~~~-~-----~~~-~~~~~~~~-~~~~~~tPGI~~~~~~~~dq 190 (231) T d1eixa_ 120 TSMEASDLVDLGMTL-SPADYAERLAALTQKCGLDGVVCS-A-----QEA-VRFKQVFG-QEFKLVTPGIRPQGSEAGDQ 190 (231) T ss_dssp TTCCHHHHHTTTCCS-CHHHHHHHHHHHHHHTTCSEEECC-G-----GGH-HHHHHHHC-SSSEEEECCBCCTTCCCTTC T ss_pred CCCCCCHHCCCCCCC-CHHHHHHHHHHHHHHHCCCCCCCC-C-----HHH-HHHHHHCC-CCCCEECCCCCCCCCCCCCC T ss_conf 212210000000135-425899998989887321221221-0-----012-34443037-76522368846688875675 Q ss_pred -----HHHHHHHCCCEEEECHHHCCCCC Q ss_conf -----89999808988997113238999 Q gi|254780801|r 197 -----FELAIASGATSVRIGSGIFGERP 219 (222) Q Consensus 197 -----~~~Ai~~Gst~vRiGs~iFG~R~ 219 (222) -+.|++.||+.+=||++|.++.+ T Consensus 191 ~r~~tp~~Ai~~GaD~iIVGR~It~a~d 218 (231) T d1eixa_ 191 RRIMTPEQALSAGVDYMVIGRPVTQSVD 218 (231) T ss_dssp CSCBCHHHHHHTTCSEEEECHHHHTSSS T ss_pred CCCCCHHHHHHCCCCEEEECCCCCCCCC T ss_conf 2017999999869999998973358999 No 15 >d1h1ya_ c.1.2.2 (A:) D-ribulose-5-phosphate 3-epimerase {Rice (Oryza sativa) [TaxId: 4530]} Probab=74.93 E-value=2.8 Score=20.15 Aligned_cols=74 Identities=18% Similarity=0.323 Sum_probs=48.9 Q ss_pred HHHHHCCCCCCHHHHEECCCCCC-C--CHHHHHHHHHHHHHCCCCE--ECCCCCH-HHHHHHHHCCCEEEECHHHCCCCC Q ss_conf 34431043110011101154334-5--2058999999988758947--2247773-489999808988997113238999 Q gi|254780801|r 146 VILCRQKYQLNVEGLMCIPPAMG-N--PKPHFYLLSEIARECKLTK--LSMGMTR-DFELAIASGATSVRIGSGIFGERP 219 (222) Q Consensus 146 ~~~i~~~~~L~i~GLMti~p~~~-d--~~~~F~~l~~l~~~~~~~~--LSmGMS~-D~~~Ai~~Gst~vRiGs~iFG~R~ 219 (222) ...+..++.+....+|++.|-.. . ....+.+.+++++...-.. .==|.+. -....++.|++.+=+||+||+.-. T Consensus 125 ~~~l~~~~~~d~vlim~v~PG~~GQ~f~~~~l~kI~~l~~~~~~~~I~VDGGIn~~~i~~l~~aGad~~V~GS~if~~~d 204 (220) T d1h1ya_ 125 FPLVEAENPVELVLVMTVEPGFGGQKFMPEMMEKVRALRKKYPSLDIEVDGGLGPSTIDVAASAGANCIVAGSSIFGAAE 204 (220) T ss_dssp HHHHHSSSCCSEEEEESSCTTCSSCCCCGGGHHHHHHHHHHCTTSEEEEESSCSTTTHHHHHHHTCCEEEESHHHHTSSC T ss_pred HHHHHCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHCCCCEEEECHHHHCCCC T ss_conf 77774235665688871479986444300466799999862897629999257999999999879999997879978999 No 16 >d1vqta1 c.1.2.3 (A:1-198) Orotidine 5'-monophosphate decarboxylase (OMP decarboxylase) {Thermotoga maritima [TaxId: 2336]} Probab=59.59 E-value=3.9 Score=19.12 Aligned_cols=140 Identities=14% Similarity=0.122 Sum_probs=68.7 Q ss_pred CCCCCHHHHHHHHCCCCCCCCCEEEECCCCCCHHHHHCCC-CHH--CCCCCCCCHHHHHHHHHHHHCCCEEEEEEEECCC Q ss_conf 0121000111100000125873023024432001320111-000--0122222001344333333114303688970046 Q gi|254780801|r 54 AENKLQEAKKKWIPLRKEWDVQLRFIGSLQSNKVSEIVSL-FDV--IETVSREKTASLLSLEMIKQSRFLPVYIQVNTGY 130 (222) Q Consensus 54 GENrvQE~~~K~~~l~~~~~i~wHfIG~LQsNKvk~i~~~-~~~--Ihsvds~~~a~~L~~~~~~~~~~~~vliQVN~~~ 130 (222) |-+-+.++.++ .++=..|.++|=||+--.+-++.+.++ +|+ ||+..-.+-++...+ ..++ .++.-.-++ T Consensus 35 G~~~i~~l~~~--~~~IflDlK~~DIpnTv~~~v~~~~~~g~d~itvH~~~G~~~l~~a~~---~~~~--~~l~Vt~Lt- 106 (198) T d1vqta1 35 GKKIFDELAKR--NLKIILDLKFCDIPSTVERSIKSWDHPAIIGFTVHSCAGYESVERALS---ATDK--HVFVVVKLT- 106 (198) T ss_dssp CTHHHHHHHTT--TCEEEEEEEECSCHHHHHHHHHHHCCTTEEEEEEEGGGCHHHHHHHHH---HCSS--EEEEECCCT- T ss_pred CHHHHHHHHHC--CCCEEEEEHHCCCCHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHH---HCCC--CCEEEEEEE- T ss_conf 49999999977--994998810137628999999998604663799974675025667665---1123--202578750- Q ss_pred CCCCCCCCCCHHHHHHHHHHCCCCCCHHHHEECCCCCCCCHHHHHHHHHHHHHCCCCEECCCC-----CHH-----HHHH Q ss_conf 656346570001222344310431100111011543345205899999998875894722477-----734-----8999 Q gi|254780801|r 131 EIQKSGIMPNQTKDFVILCRQKYQLNVEGLMCIPPAMGNPKPHFYLLSEIARECKLTKLSMGM-----TRD-----FELA 200 (222) Q Consensus 131 e~~K~G~~p~el~~l~~~i~~~~~L~i~GLMti~p~~~d~~~~F~~l~~l~~~~~~~~LSmGM-----S~D-----~~~A 200 (222) +-+|. +.+....+..+..+.+.|+.+ +| ....+.+++....++=|- ++| -..| T Consensus 107 --S~~~~----~~~~~~~~~~l~~~g~~~vv~-~~----------~~~~~~~~~~~~iitPGIr~~~~~dDQkr~~t~~a 169 (198) T d1vqta1 107 --SMEGS----LEDYMDRIEKLNKLGCDFVLP-GP----------WAKALREKIKGKILVPGIRMEVKADDQKDVVTLEE 169 (198) T ss_dssp --TSCCC----HHHHHHHHHHHHHHTCEEECC-HH----------HHHHHTTTCCSCEEECCBC---------CCBCHHH T ss_pred --CCCCC----HHHHHHHHHHHHHHCCCCCCC-CC----------HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHH T ss_conf --34553----278899999999843475656-61----------45555330222200542155777788054158999 Q ss_pred HHHCCCEEEECHHHCCCC Q ss_conf 980898899711323899 Q gi|254780801|r 201 IASGATSVRIGSGIFGER 218 (222) Q Consensus 201 i~~Gst~vRiGs~iFG~R 218 (222) ++.||+.+=||+.|..+- T Consensus 170 i~~GAd~iVVGR~It~s~ 187 (198) T d1vqta1 170 MKGIANFAVLGREIYLSE 187 (198) T ss_dssp HTTTCSEEEESHHHHTSS T ss_pred HHCCCCEEEECCCCCCCC T ss_conf 984999999897556899 No 17 >d1tqxa_ c.1.2.2 (A:) D-ribulose-5-phosphate 3-epimerase {Plasmodium falciparum [TaxId: 5833]} Probab=57.14 E-value=6.1 Score=17.84 Aligned_cols=67 Identities=21% Similarity=0.342 Sum_probs=44.5 Q ss_pred CCCCHHHHEECCCCCC-C--CHHHHHHHHHHHHHCC-CC-EECCCCCH-HHHHHHHHCCCEEEECHHHCCCCC Q ss_conf 3110011101154334-5--2058999999988758-94-72247773-489999808988997113238999 Q gi|254780801|r 153 YQLNVEGLMCIPPAMG-N--PKPHFYLLSEIARECK-LT-KLSMGMTR-DFELAIASGATSVRIGSGIFGERP 219 (222) Q Consensus 153 ~~L~i~GLMti~p~~~-d--~~~~F~~l~~l~~~~~-~~-~LSmGMS~-D~~~Ai~~Gst~vRiGs~iFG~R~ 219 (222) ..+...=+|++.|-.. . ....+.+.+++++... +. +.==|.+. -.+...+.|++.+=.||+||+.-+ T Consensus 134 ~~~d~vlim~V~pG~~GQ~f~~~~l~KI~~lr~~~~~~~I~VDGGIn~~~i~~l~~aGad~iV~GS~if~~~d 206 (221) T d1tqxa_ 134 NLINTVLVMTVEPGFGGQSFMHDMMGKVSFLRKKYKNLNIQVDGGLNIETTEISASHGANIIVAGTSIFNAED 206 (221) T ss_dssp TCCSEEEEESSCTTCSSCCCCGGGHHHHHHHHHHCTTCEEEEESSCCHHHHHHHHHHTCCEEEESHHHHTCSS T ss_pred CCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHCCCCEEEECHHHHCCCC T ss_conf 4456899986313454312475126788899873678434897366887699999769999997859878999 No 18 >d1to3a_ c.1.10.1 (A:) Putative aldolase YihT {Salmonella typhimurium [TaxId: 90371]} Probab=50.92 E-value=7.6 Score=17.19 Aligned_cols=109 Identities=11% Similarity=0.038 Sum_probs=60.0 Q ss_pred CHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCC-CCHHHHHHHHHHCCCCCCHHHHEECCCCCC--CCHHHHHHHHHH Q ss_conf 00134433333311430368897004665634657-000122234431043110011101154334--520589999999 Q gi|254780801|r 104 KTASLLSLEMIKQSRFLPVYIQVNTGYEIQKSGIM-PNQTKDFVILCRQKYQLNVEGLMCIPPAMG--NPKPHFYLLSEI 180 (222) Q Consensus 104 ~~a~~L~~~~~~~~~~~~vliQVN~~~e~~K~G~~-p~el~~l~~~i~~~~~L~i~GLMti~p~~~--d~~~~F~~l~~l 180 (222) ..++++..+|.+.+ +++++++=+-+.+...+.. |+.+...+... ..+-+.=+-+=-|... ...+....+..+ T Consensus 140 ~~~~~l~~~c~~~g--lp~llE~l~~~~~~~~~~~~~~~i~~a~r~~---~e~GaDi~K~~~p~~~~~~~~~~~~~~~~~ 214 (291) T d1to3a_ 140 NMVKEFNELCHSNG--LLSIIEPVVRPPRCGDKFDREQAIIDAAKEL---GDSGADLYKVEMPLYGKGARSDLLTASQRL 214 (291) T ss_dssp HHHHHHHHHHHTTT--CEEEEEEEECCCSSCSCCCHHHHHHHHHHHH---TTSSCSEEEECCGGGGCSCHHHHHHHHHHH T ss_pred HHHHHHHHHHHHCC--CCCEEEEEECCCCCCCCCCHHHHHHHHHHHH---HHCCCCEEEEECCCCCHHHHHHHHHHHHHH T ss_conf 99999999999739--9616898744888654443188899999999---864883799856887205567789988888 Q ss_pred HHHCC--CCEECCCCCHH-----HHHHHHHCCCEEEECHHHCCC Q ss_conf 88758--94722477734-----899998089889971132389 Q gi|254780801|r 181 ARECK--LTKLSMGMTRD-----FELAIASGATSVRIGSGIFGE 217 (222) Q Consensus 181 ~~~~~--~~~LSmGMS~D-----~~~Ai~~Gst~vRiGs~iFG~ 217 (222) .+... .-.||.|.+.| ++.|.+.|+.=+=+|++||.. T Consensus 215 ~~~~~~p~vvLs~G~~~~~f~~~l~~A~~aGa~G~~~GR~iw~~ 258 (291) T d1to3a_ 215 NGHINMPWVILSSGVDEKLFPRAVRVAMEAGASGFLAGRAVWSS 258 (291) T ss_dssp HHTCCSCEEECCTTSCTTTHHHHHHHHHHTTCCEEEESHHHHGG T ss_pred HHCCCCCEEEEECCCCHHHHHHHHHHHHHCCCEEEEECHHHHHC T ss_conf 60489858999089898999999999997799099857464348 No 19 >d1dbta_ c.1.2.3 (A:) Orotidine 5'-monophosphate decarboxylase (OMP decarboxylase) {Bacillus subtilis [TaxId: 1423]} Probab=47.80 E-value=3.9 Score=19.17 Aligned_cols=155 Identities=14% Similarity=0.155 Sum_probs=73.9 Q ss_pred CCCCCCCHHHHHHHHCCCCCCCCCEEEECCCCCCHHHHHCCC-CHH--CCCCCCCCHHHHHHHHHHHH----CCCEEEEE Q ss_conf 000121000111100000125873023024432001320111-000--01222220013443333331----14303688 Q gi|254780801|r 52 IFAENKLQEAKKKWIPLRKEWDVQLRFIGSLQSNKVSEIVSL-FDV--IETVSREKTASLLSLEMIKQ----SRFLPVYI 124 (222) Q Consensus 52 ~fGENrvQE~~~K~~~l~~~~~i~wHfIG~LQsNKvk~i~~~-~~~--Ihsvds~~~a~~L~~~~~~~----~~~~~vli 124 (222) .+|..-+.++++.. ++=..|.++|=||+.-..-++.+..+ +|+ +|.+.-....+.....+.+. ++...++. T Consensus 41 ~~G~~~i~~l~~~~--~~IflD~K~~DIgnTv~~~~~~~~~~~~d~vtvh~~~G~~~i~aa~~~~~~~~~~~~~~~~l~~ 118 (237) T d1dbta_ 41 QEGPSIVKQLKERN--CELFLDLKLHDIPTTVNKAMKRLASLGVDLVNVHAAGGKKMMQAALEGLEEGTPAGKKRPSLIA 118 (237) T ss_dssp HHTHHHHHHHHHTT--CEEEEEEEECSCHHHHHHHHHHHHTTTCSEEEEEGGGCHHHHHHHHHHHHHHSCTTSCCCEEEE T ss_pred HCCHHHHHHHHHCC--HHEEHHHHHCCCCHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHCCHHCCCCCEEEE T ss_conf 15979999987505--2102101433575378888876532365567751455458999999865420100256650688 Q ss_pred EEECCCCCC-----CCCCCCCHHHHHHHHH-HCCCCCCHHHHEECCCCCCCCHHHHHHHHHHHHHCC--CCEECCC---- Q ss_conf 970046656-----3465700012223443-104311001110115433452058999999988758--9472247---- Q gi|254780801|r 125 QVNTGYEIQ-----KSGIMPNQTKDFVILC-RQKYQLNVEGLMCIPPAMGNPKPHFYLLSEIARECK--LTKLSMG---- 192 (222) Q Consensus 125 QVN~~~e~~-----K~G~~p~el~~l~~~i-~~~~~L~i~GLMti~p~~~d~~~~F~~l~~l~~~~~--~~~LSmG---- 192 (222) =..++.-.+ ..|.... ..+.+... .......+.|+.|=|- + +..+++... +..++=| T Consensus 119 v~~lts~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~g~~g~v~s~~---~-------~~~~r~~~~~~~~ivtPGI~~~ 187 (237) T d1dbta_ 119 VTQLTSTSEQIMKDELLIEKS-LIDTVVHYSKQAEESGLDGVVCSVH---E-------AKAIYQAVSPSFLTVTPGIRMS 187 (237) T ss_dssp ECSCTTCCHHHHHHTSCBCSC-HHHHHHHHHHHHHHTTCSEEECCGG---G-------HHHHTTTSCTTCEEEECCBCCT T ss_pred EECCCCCCHHHHHHHHHHHCC-CCHHHHHHHHHHHHCCCCEEECCHH---H-------HHHHCCCCCCCEEEECCCCCCC T ss_conf 741466562889865432045-2124379887566429514420203---4-------4431122213035761364457 Q ss_pred -C-CHH------HHHHHHHCCCEEEECHHHCCCCC Q ss_conf -7-734------89999808988997113238999 Q gi|254780801|r 193 -M-TRD------FELAIASGATSVRIGSGIFGERP 219 (222) Q Consensus 193 -M-S~D------~~~Ai~~Gst~vRiGs~iFG~R~ 219 (222) . .+| -..|++.||+.+=||++|..+.+ T Consensus 188 ~~~~~dq~r~~tp~~a~~~GaD~iIVGR~I~~s~d 222 (237) T d1dbta_ 188 EDAANDQVRVATPAIAREKGSSAIVVGRSITKAED 222 (237) T ss_dssp TSCCTTCSSCBCHHHHHHTTCSEEEECHHHHTSSC T ss_pred CCCCCCCEEECCHHHHHHCCCCEEEECCCCCCCCC T ss_conf 77778966328999999869999998984558999 No 20 >d2b0ja2 c.2.1.6 (A:1-242) 5,10-methenyltetrahydromethanopterin hydrogenase, HMD {Archaeon Methanocaldococcus jannaschii [TaxId: 2190]} Probab=32.72 E-value=14 Score=15.33 Aligned_cols=141 Identities=13% Similarity=0.017 Sum_probs=78.7 Q ss_pred CCCHHHHHHHHHCCCCCCCCCCCHHHHHHH-HCCCCCCCCCEEEECC-----CCCCHHHHHCCCCHHC-CCCCCCCHHHH Q ss_conf 999999999997298100012100011110-0000125873023024-----4320013201110000-12222200134 Q gi|254780801|r 36 MVDSKKIRVALSCGQVIFAENKLQEAKKKW-IPLRKEWDVQLRFIGS-----LQSNKVSEIVSLFDVI-ETVSREKTASL 108 (222) Q Consensus 36 ~~~~e~I~~~~~~G~~~fGENrvQE~~~K~-~~l~~~~~i~wHfIG~-----LQsNKvk~i~~~~~~I-hsvds~~~a~~ 108 (222) -...+++.+++..|..+.=|-...+...+. ...+..++-..||+-+ -..+-.+.++..+|+| -+|-..+.... T Consensus 78 d~d~~~v~~~~~~g~~~i~~p~l~~~v~~~~~~~~~~~~~~~~~~~pEe~Gv~v~~d~~Eav~~ADiII~~vP~~~~v~~ 157 (242) T d2b0ja2 78 EFDPKEVMEAHLSGNPESIMPKIREVVKAKAKELPKPPKACIHLVHPEDVGLKVTSDDREAVEGADIVITWLPKGNKQPD 157 (242) T ss_dssp CSCHHHHHHHHHTTCGGGTHHHHHHHHHHHHHTSCCTTTEEEESSCGGGGTCEEESCHHHHHTTCSEEEECCTTCTTHHH T ss_pred ECCHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHCCCCCCCHHHCCCHHHCCCEEECCHHHHHHCCCEEEEEEECHHHHHH T ss_conf 48889999998558921212018999999987366886203312798888988979899997268868995116899999 Q ss_pred HHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHEECCCCCC----------CCHHHHHHHH Q ss_conf 433333311430368897004665634657000122234431043110011101154334----------5205899999 Q gi|254780801|r 109 LSLEMIKQSRFLPVYIQVNTGYEIQKSGIMPNQTKDFVILCRQKYQLNVEGLMCIPPAMG----------NPKPHFYLLS 178 (222) Q Consensus 109 L~~~~~~~~~~~~vliQVN~~~e~~K~G~~p~el~~l~~~i~~~~~L~i~GLMti~p~~~----------d~~~~F~~l~ 178 (222) +-+.....-++-.++ ++.+ -+.+....++.+.+.. .++++.+.+-|++... -..+.|.++. T Consensus 158 Vi~~I~~~l~~g~Ii--id~S------Ti~~~~~~~l~e~l~~-kgi~vi~~hp~a~pe~~g~~li~~~~aseE~iekv~ 228 (242) T d2b0ja2 158 IIKKFADAIPEGAIV--THAC------TIPTTKFAKIFKDLGR-EDLNITSYHPGCVPEMKGQVYIAEGYASEEAVNKLY 228 (242) T ss_dssp HHHHHGGGSCTTCEE--EECS------SSCHHHHHHHHHHTTC-TTSEEEECBCSSCTTTCCCEEEEESSSCHHHHHHHH T ss_pred HHHHHHHHCCCCCEE--EECC------CCCHHHHHHHHHHCCC-CCCEEECCCCCCCCCCCCCEEEECCCCCHHHHHHHH T ss_conf 999999648999689--9658------7868999999986043-798898788537676456369941778999999999 Q ss_pred HHHHHCC Q ss_conf 9988758 Q gi|254780801|r 179 EIARECK 185 (222) Q Consensus 179 ~l~~~~~ 185 (222) ++.+..+ T Consensus 229 elles~G 235 (242) T d2b0ja2 229 EIGKIAR 235 (242) T ss_dssp HHHHHHH T ss_pred HHHHHHC T ss_conf 9999979 No 21 >d2czda1 c.1.2.3 (A:1-206) Orotidine 5'-monophosphate decarboxylase (OMP decarboxylase) {Pyrococcus horikoshii [TaxId: 53953]} Probab=30.62 E-value=16 Score=15.10 Aligned_cols=148 Identities=14% Similarity=0.122 Sum_probs=66.8 Q ss_pred CCCCCCHHHHHHHHCCCCCCCCCEEEECCCCCCHHHHHCC-CCHH--CCCCCCCCHHHHHHHHHHHHCCCEEEEEEEECC Q ss_conf 0012100011110000012587302302443200132011-1000--012222200134433333311430368897004 Q gi|254780801|r 53 FAENKLQEAKKKWIPLRKEWDVQLRFIGSLQSNKVSEIVS-LFDV--IETVSREKTASLLSLEMIKQSRFLPVYIQVNTG 129 (222) Q Consensus 53 fGENrvQE~~~K~~~l~~~~~i~wHfIG~LQsNKvk~i~~-~~~~--Ihsvds~~~a~~L~~~~~~~~~~~~vliQVN~~ 129 (222) +|-.-+.++.++. .++=..|+++|=||+-=..-++.+.+ .+|+ ||........+.. .+... .++-.-++ T Consensus 38 ~G~~~i~~l~~~~-~~~if~DlK~~Di~~t~~~~~~~~~~~gad~~Tvh~~~g~~~i~~~----~~~~~---~~~~~~~s 109 (206) T d2czda1 38 SGVDIIRRLKEET-GVEIIADLKLADIPNTNRLIARKVFGAGADYVIVHTFVGRDSVMAV----KELGE---IIMVVEMS 109 (206) T ss_dssp HCTTHHHHHHHHH-CCEEEEEEEECSCHHHHHHHHHHHHHTTCSEEEEESTTCHHHHHHH----HTTSE---EEEECCCC T ss_pred CCHHHHHHHHHHC-CCEEEEEEEEEEECCCCHHEEHHHCCCCCCEEEEEECCCHHHHHHH----HHCCC---CEEEEECC T ss_conf 4988999999855-9828977545330463100001111544417876400338888776----52266---44787315 Q ss_pred CCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHEECCCCCCCCHHHHHHHHHHHHHCC--CCEECCC--C-CHHHHHHHHHC Q ss_conf 66563465700012223443104311001110115433452058999999988758--9472247--7-73489999808 Q gi|254780801|r 130 YEIQKSGIMPNQTKDFVILCRQKYQLNVEGLMCIPPAMGNPKPHFYLLSEIARECK--LTKLSMG--M-TRDFELAIASG 204 (222) Q Consensus 130 ~e~~K~G~~p~el~~l~~~i~~~~~L~i~GLMti~p~~~d~~~~F~~l~~l~~~~~--~~~LSmG--M-S~D~~~Ai~~G 204 (222) ... ...+ .+++.+.+..+... ....|+-+.+.. + ..+..+++.+. +..+.=| . .++-+.|++.| T Consensus 110 ~~~-~~~~-~~~~~~~~~~~a~~--~~~~g~~~~~~~---~----~~~~~~r~~~~~~~~i~~pGI~~~~~~~~~ai~~G 178 (206) T d2czda1 110 HPG-ALEF-INPLTDRFIEVANE--IEPFGVIAPGTR---P----ERIGYIRDRLKEGIKILAPGIGAQGGKAKDAVKAG 178 (206) T ss_dssp SGG-GGTT-TGGGHHHHHHHHHH--HCCSEEECCCSS---T----HHHHHHHHHSCTTCEEEECCCCSSTTHHHHHHHHT T ss_pred CCC-CCCC-CCHHHHHHHHHHHH--CCCCCCCCCCCC---C----HHHHHHHHHHCCCCEEECCCCCCCCCCHHHHHHHC T ss_conf 776-4210-14799999999974--233455444457---1----36666665422565377787134689999999809 Q ss_pred CCEEEECHHHCCCCC Q ss_conf 988997113238999 Q gi|254780801|r 205 ATSVRIGSGIFGERP 219 (222) Q Consensus 205 st~vRiGs~iFG~R~ 219 (222) |+.+=+||+|+++.+ T Consensus 179 ad~iVvGR~I~~a~d 193 (206) T d2czda1 179 ADYIIVGRAIYNAPN 193 (206) T ss_dssp CSEEEECHHHHTSSS T ss_pred CCEEEECHHHCCCCC T ss_conf 999998946615899 No 22 >d1y0ea_ c.1.2.5 (A:) Putative N-acetylmannosamine-6-phosphate 2-epimerase NanE {Staphylococcus aureus [TaxId: 1280]} Probab=27.08 E-value=18 Score=14.70 Aligned_cols=47 Identities=15% Similarity=0.303 Sum_probs=37.5 Q ss_pred HHHHHHHHHHHHHCCCCE-ECCCCC--HHHHHHHHHCCCEEEECHHHCCCCC Q ss_conf 058999999988758947-224777--3489999808988997113238999 Q gi|254780801|r 171 KPHFYLLSEIARECKLTK-LSMGMT--RDFELAIASGATSVRIGSGIFGERP 219 (222) Q Consensus 171 ~~~F~~l~~l~~~~~~~~-LSmGMS--~D~~~Ai~~Gst~vRiGs~iFG~R~ 219 (222) ...+..++++.+....+. -+-|.+ .|...+++.|++-|=|||+|. || T Consensus 161 ~~~~~~i~~~~~~~~iPVia~GGI~t~~d~~~~~~~GAdgV~iGsAi~--rp 210 (222) T d1y0ea_ 161 QNDFQFLKDVLQSVDAKVIAEGNVITPDMYKRVMDLGVHCSVVGGAIT--RP 210 (222) T ss_dssp HHHHHHHHHHHHHCCSEEEEESSCCSHHHHHHHHHTTCSEEEECHHHH--CH T ss_pred HHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHCCCCEEEECHHHC--CH T ss_conf 648999999973578858986898999999999986999999831116--99 No 23 >d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]} Probab=25.33 E-value=13 Score=15.74 Aligned_cols=71 Identities=10% Similarity=0.186 Sum_probs=46.2 Q ss_pred CCCCCCCCCCCHHHHHHHHCCCCCCCCCEE-EECCCCCCHHHHHCCCCH-HCCCCCCCCHHHHHHHHHHHHCCCE Q ss_conf 298100012100011110000012587302-302443200132011100-0012222200134433333311430 Q gi|254780801|r 48 CGQVIFAENKLQEAKKKWIPLRKEWDVQLR-FIGSLQSNKVSEIVSLFD-VIETVSREKTASLLSLEMIKQSRFL 120 (222) Q Consensus 48 ~G~~~fGENrvQE~~~K~~~l~~~~~i~wH-fIG~LQsNKvk~i~~~~~-~Ihsvds~~~a~~L~~~~~~~~~~~ 120 (222) +...++|.++++.+.++...+.. ++.-. +...+-+.-.......+| +|...|+......++..+.+.+++. T Consensus 76 ~~~~diG~~K~~~a~~~l~~~np--~~~i~~~~~~~~~~~~~~~~~~~divid~~d~~~~~~~in~~~~~~~ip~ 148 (247) T d1jw9b_ 76 HSDATVGQPKVESARDALTRINP--HIAITPVNALLDDAELAALIAEHDLVLDCTDNVAVRNQLNAGCFAAKVPL 148 (247) T ss_dssp CCGGGTTSBHHHHHHHHHHHHCT--TSEEEEECSCCCHHHHHHHHHTSSEEEECCSSHHHHHHHHHHHHHHTCCE T ss_pred CCHHHCCCHHHHHHHHHHHHHHC--CCCHHHHHHHHHHCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHCCCC T ss_conf 64765293479888888887410--22102144553220110113231045402422555336779999819986 No 24 >d1eepa_ c.1.5.1 (A:) Inosine monophosphate dehydrogenase (IMPDH) {Lyme disease spirochete (Borrelia burgdorferi) [TaxId: 139]} Probab=24.79 E-value=20 Score=14.42 Aligned_cols=50 Identities=28% Similarity=0.482 Sum_probs=36.7 Q ss_pred HHHHHHHHHHHHHC---CCCEECCC---CCHHHHHHHHHCCCEEEECHHHCCCCCC Q ss_conf 05899999998875---89472247---7734899998089889971132389999 Q gi|254780801|r 171 KPHFYLLSEIAREC---KLTKLSMG---MTRDFELAIASGATSVRIGSGIFGERPC 220 (222) Q Consensus 171 ~~~F~~l~~l~~~~---~~~~LSmG---MS~D~~~Ai~~Gst~vRiGs~iFG~R~~ 220 (222) .+.|....+.++.. ..+.++.| -|+|.--|+.+||+.|=+|+.+=|.-.. T Consensus 237 ~pq~sai~~~~~~~~~~~vpiIADGGi~~~Gdi~KAla~GAd~VMlG~~lAg~~Es 292 (388) T d1eepa_ 237 VPQITAICDVYEACNNTNICIIADGGIRFSGDVVKAIAAGADSVMIGNLFAGTKES 292 (388) T ss_dssp CCHHHHHHHHHHHHTTSSCEEEEESCCCSHHHHHHHHHHTCSEEEECHHHHTBTTS T ss_pred CCHHHHHHHHHHHHCCCCCEEEECCCCCCCCCEEEEEEECCCEEECCHHHHCCCCC T ss_conf 42388999999986157715785366673773013678515503405365413678 No 25 >d1yova1 c.111.1.2 (A:6-534) Amyloid beta precursor protein-binding protein 1, APPBP1 {Human (Homo sapiens) [TaxId: 9606]} Probab=23.89 E-value=20 Score=14.31 Aligned_cols=91 Identities=19% Similarity=0.177 Sum_probs=55.1 Q ss_pred HHCEEEEECCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCCCCEEEEC----CCCCCHHHHHCCCCHH-CCCC Q ss_conf 4418998718999999999997298100012100011110000012587302302----4432001320111000-0122 Q gi|254780801|r 26 DSVSLVAVSKMVDSKKIRVALSCGQVIFAENKLQEAKKKWIPLRKEWDVQLRFIG----SLQSNKVSEIVSLFDV-IETV 100 (222) Q Consensus 26 ~~v~LiaVtK~~~~e~I~~~~~~G~~~fGENrvQE~~~K~~~l~~~~~i~wHfIG----~LQsNKvk~i~~~~~~-Ihsv 100 (222) .+++|+= -.....+++-.-+-+...++|.+|++.+.++..++.. ++.++.+- .++.+ ....+..+|+ |-+. T Consensus 50 g~itivD-~d~v~~sdL~rqf~~~~~diGk~ka~~~~~~L~~lNp--~v~i~~~~~~~~~~~~~-~~~~~~~~dvVv~~~ 125 (529) T d1yova1 50 GSFTIID-GNQVSGEDAGNNFFLQRSSIGKNRAEAAMEFLQELNS--DVSGSFVEESPENLLDN-DPSFFCRFTVVVATQ 125 (529) T ss_dssp SEEEEEC-CSBCCHHHHHHCTTCCGGGTTSBHHHHHHHHHHTTCT--TSBCCEESSCHHHHHHS-CGGGGGGCSEEEEES T ss_pred CEEEEEC-CCCCCHHHCCCHHCCCHHHCCCHHHHHHHHHHHHHCC--CCCEEEECCCCHHHHHH-HHHHHCCCCEEEECC T ss_conf 8899985-9968966658201579455787999999999998689--99579973770134443-798856899999899 Q ss_pred CCCCHHHHHHHHHHHHCCCE Q ss_conf 22200134433333311430 Q gi|254780801|r 101 SREKTASLLSLEMIKQSRFL 120 (222) Q Consensus 101 ds~~~a~~L~~~~~~~~~~~ 120 (222) |+......|+..+.+.+.+. T Consensus 126 ~~~~~~~~l~~~c~~~~ip~ 145 (529) T d1yova1 126 LPESTSLRLADVLWNSQIPL 145 (529) T ss_dssp CCHHHHHHHHHHHHHHTCCE T ss_pred CCHHHHHHHHHHHHHCCCCE T ss_conf 99999999999999829999 No 26 >d1o08a_ c.108.1.6 (A:) beta-Phosphoglucomutase {Lactococcus lactis [TaxId: 1358]} Probab=23.71 E-value=21 Score=14.29 Aligned_cols=37 Identities=14% Similarity=0.226 Sum_probs=24.6 Q ss_pred HHHHHHHCCC---CEECCCCC-HHHHHHHHHCCCEEEECHH Q ss_conf 9999887589---47224777-3489999808988997113 Q gi|254780801|r 177 LSEIARECKL---TKLSMGMT-RDFELAIASGATSVRIGSG 213 (222) Q Consensus 177 l~~l~~~~~~---~~LSmGMS-~D~~~Ai~~Gst~vRiGs~ 213 (222) +....+.+++ ..|-.|=| .|.+.|-..|-+-|-|++. T Consensus 151 ~~~~l~~~~i~~~~~l~VgD~~~di~~A~~aG~~~i~v~~~ 191 (221) T d1o08a_ 151 FIAAAHAVGVAPSESIGLEDSQAGIQAIKDSGALPIGVGRP 191 (221) T ss_dssp HHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEESCH T ss_pred HHHHHHHCCCCCCEEEEEECCHHHHHHHHHCCCEEEEECCH T ss_conf 88889873988740799966988899999869989999981 No 27 >d1km4a_ c.1.2.3 (A:) Orotidine 5'-monophosphate decarboxylase (OMP decarboxylase) {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]} Probab=23.63 E-value=21 Score=14.28 Aligned_cols=152 Identities=12% Similarity=0.045 Sum_probs=73.0 Q ss_pred CCCCCCHHHHHHHHCCCCCCCCCEEEECCCCCCHHHHHCC-CCH--HCCCCCCCCHHHHHHHHHHHHCCCEEEEEEEECC Q ss_conf 0012100011110000012587302302443200132011-100--0012222200134433333311430368897004 Q gi|254780801|r 53 FAENKLQEAKKKWIPLRKEWDVQLRFIGSLQSNKVSEIVS-LFD--VIETVSREKTASLLSLEMIKQSRFLPVYIQVNTG 129 (222) Q Consensus 53 fGENrvQE~~~K~~~l~~~~~i~wHfIG~LQsNKvk~i~~-~~~--~Ihsvds~~~a~~L~~~~~~~~~~~~vliQVN~~ 129 (222) +|-.-++++.++.. ++=..|.++|=||+.=..=++.+.+ .+| .||+.-.....+...+.+.+.++. +++=..++ T Consensus 41 ~G~~~v~~l~~~~~-~~i~~D~K~~DIg~t~~~~~~~~~~~gad~~TVh~~~g~~~i~~~~~~a~~~~~~--~~~l~~~s 117 (212) T d1km4a_ 41 EGMDIIAEFRKRFG-CRIIADFAVADIPETNEKICRATFKAGADAIIVHGFPGADSVRACLNVAEEMGRE--VFLLTEMS 117 (212) T ss_dssp HCTHHHHHHHHHHC-CEEEEEEEECSCHHHHHHHHHHHHHTTCSEEEEESTTCHHHHHHHHHHHHHHTCE--EEEECSCS T ss_pred CCHHHHHHHHHHCC-CCEEHHHHHHCCCCHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHCCCC--CCCCHHHC T ss_conf 29999999987466-4265333560244388876764303455478774118968899999999841974--32220001 Q ss_pred CCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHEECCCCCCCCHHHHHHHHHHHHHCC--CCEECCCC---CHHHHHHHHHC Q ss_conf 66563465700012223443104311001110115433452058999999988758--94722477---73489999808 Q gi|254780801|r 130 YEIQKSGIMPNQTKDFVILCRQKYQLNVEGLMCIPPAMGNPKPHFYLLSEIARECK--LTKLSMGM---TRDFELAIASG 204 (222) Q Consensus 130 ~e~~K~G~~p~el~~l~~~i~~~~~L~i~GLMti~p~~~d~~~~F~~l~~l~~~~~--~~~LSmGM---S~D~~~Ai~~G 204 (222) .... .-+......+++....+ ..+.|+-+.+ .+...++.+++..+ +-.++=|- .+|-..++ .| T Consensus 118 ~~~~-~~~~~~~~~~~~~~~~~---~g~~g~v~~~-------~~~~~i~~ir~~~~~~~~~vtpGI~~~g~~~~d~~-~~ 185 (212) T d1km4a_ 118 HPGA-EMFIQGAADEIARMGVD---LGVKNYVGPS-------TRPERLSRLREIIGQDSFLISPGVGAQGGDPGETL-RF 185 (212) T ss_dssp SGGG-GTTHHHHHHHHHHHHHH---HTCCEEECCT-------TCHHHHHHHHHHHCSSSEEEECCBSTTSBCHHHHT-TT T ss_pred CHHH-HHHHHHHHHHHHHHHHH---HCCCCCCCCC-------CCHHHHHHHHHCCCCCEEEECCCCCCCCCCHHHHH-HH T ss_conf 2045-54332478999999988---3876421345-------67777765654058751687676335889988997-31 Q ss_pred CCEEEECHHHCCCCC Q ss_conf 988997113238999 Q gi|254780801|r 205 ATSVRIGSGIFGERP 219 (222) Q Consensus 205 st~vRiGs~iFG~R~ 219 (222) ++.+=|||+|+++.+ T Consensus 186 ad~iIvGR~I~~a~d 200 (212) T d1km4a_ 186 ADAIIVGRSIYLADN 200 (212) T ss_dssp CSEEEECHHHHTSSS T ss_pred CCEEEECCHHCCCCC T ss_conf 999998902044989 No 28 >d1c0aa1 b.40.4.1 (A:1-106) Aspartyl-tRNA synthetase (AspRS) {Escherichia coli [TaxId: 562]} Probab=23.07 E-value=12 Score=15.83 Aligned_cols=76 Identities=13% Similarity=0.182 Sum_probs=47.0 Q ss_pred CEEEECCCCCCHHHHHCCCCHHCCCCCCCCHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCC Q ss_conf 30230244320013201110000122222001344333333114303688970046656346570001222344310431 Q gi|254780801|r 75 QLRFIGSLQSNKVSEIVSLFDVIETVSREKTASLLSLEMIKQSRFLPVYIQVNTGYEIQKSGIMPNQTKDFVILCRQKYQ 154 (222) Q Consensus 75 ~wHfIG~LQsNKvk~i~~~~~~Ihsvds~~~a~~L~~~~~~~~~~~~vliQVN~~~e~~K~G~~p~el~~l~~~i~~~~~ 154 (222) +-|++|.|+.+.+.+-+...-|||++-..+-..-+.-+ .. ...+|+-+..+. .+..+++..+...+- T Consensus 2 Rth~cgeL~~~~~g~~V~v~GWv~~~R~~g~i~Fi~LR-D~-----~G~~Q~v~~~~~-------~~~~~~~~~l~~Es~ 68 (106) T d1c0aa1 2 RTEYCGQLRLSHVGQQVTLCGWVNRRRDLGSLIFIDMR-DR-----EGIVQVFFDPDR-------ADALKLASELRNEFC 68 (106) T ss_dssp CSSCGGGCCGGGTTCEEEEEEEEEEEEECSSCEEEEEE-ET-----TEEEEEEECGGG-------HHHHHHHTTCCTTCE T ss_pred CCEECCCCCHHHCCCEEEEEEEEEEEEECCCCEEEEEE-CC-----CEEEEEEECCCC-------HHHHHHHHHHCCCCE T ss_conf 84382218957999989999999875528983999998-59-----757758952540-------467899976170006 Q ss_pred CCHHHHEEC Q ss_conf 100111011 Q gi|254780801|r 155 LNVEGLMCI 163 (222) Q Consensus 155 L~i~GLMti 163 (222) +.+.|...- T Consensus 69 v~V~G~V~~ 77 (106) T d1c0aa1 69 IQVTGTVRA 77 (106) T ss_dssp EEEEEEEEE T ss_pred EEEEEEEEC T ss_conf 998727751 No 29 >d1ps9a1 c.1.4.1 (A:1-330) 2,4-dienoyl-CoA reductase, N-terminal domain {Escherichia coli [TaxId: 562]} Probab=21.54 E-value=23 Score=14.01 Aligned_cols=102 Identities=12% Similarity=0.126 Sum_probs=58.3 Q ss_pred HHHCCCEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHCC--CCCCHHHHEE---CCCCC-CCCHHHHHHH-HHHHHHCCC Q ss_conf 331143036889700466563465700012223443104--3110011101---15433-4520589999-999887589 Q gi|254780801|r 114 IKQSRFLPVYIQVNTGYEIQKSGIMPNQTKDFVILCRQK--YQLNVEGLMC---IPPAM-GNPKPHFYLL-SEIARECKL 186 (222) Q Consensus 114 ~~~~~~~~vliQVN~~~e~~K~G~~p~el~~l~~~i~~~--~~L~i~GLMt---i~p~~-~d~~~~F~~l-~~l~~~~~~ 186 (222) ...+....+.+-++.. |..+.|..+++..++++.+.+. .-+.+.+-+. .+... ..+...|..+ +.++..... T Consensus 203 ~~vg~d~~v~~R~s~~-d~~~~g~~~~~~~~~~~~l~~~g~d~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ik~~~~~ 281 (330) T d1ps9a1 203 ERVGNDFIIIYRLSML-DLVEDGGTFAETVELAQAIEAAGATIINTGIGWHEARIPTIATPVPRGAFSWVTRKLKGHVSL 281 (330) T ss_dssp HHHCSSSEEEEEEEEE-CCSTTCCCHHHHHHHHHHHHHHTCSEEEEEECBTTCSSCSSSTTSCTTTTHHHHHHHTTSCSS T ss_pred HHCCCCCEEEECCCCC-CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCC T ss_conf 9738876057515610-014688888999999999998500022112465444323347777620679999999864796 Q ss_pred CEECCCCCHH---HHHHHHHC-CCEEEECHHHCC Q ss_conf 4722477734---89999808-988997113238 Q gi|254780801|r 187 TKLSMGMTRD---FELAIASG-ATSVRIGSGIFG 216 (222) Q Consensus 187 ~~LSmGMS~D---~~~Ai~~G-st~vRiGs~iFG 216 (222) +.+.-|.-.| -+.+|++| +.+|=+|+.+.. T Consensus 282 pvi~~G~i~~~~~ae~~l~~g~~D~V~~gR~~ia 315 (330) T d1ps9a1 282 PLVTTNRINDPQVADDILSRGDADMVSMARPFLA 315 (330) T ss_dssp CEEECSSCCSHHHHHHHHHTTSCSEEEESTHHHH T ss_pred EEEEECCCCCHHHHHHHHHCCCCCHHHHHHHHHH T ss_conf 1999699898999999998799661576299986 No 30 >d1yxya1 c.1.2.5 (A:4-233) Putative N-acetylmannosamine-6-phosphate 2-epimerase NanE {Streptococcus pyogenes [TaxId: 1314]} Probab=21.33 E-value=18 Score=14.63 Aligned_cols=42 Identities=17% Similarity=0.233 Sum_probs=29.4 Q ss_pred HHHHHHHCCCCEE-CCCCC--HHHHHHHHHCCCEEEECHHHCCCCCC Q ss_conf 9999887589472-24777--34899998089889971132389999 Q gi|254780801|r 177 LSEIARECKLTKL-SMGMT--RDFELAIASGATSVRIGSGIFGERPC 220 (222) Q Consensus 177 l~~l~~~~~~~~L-SmGMS--~D~~~Ai~~Gst~vRiGs~iFG~R~~ 220 (222) ..........+.+ .-|-+ .|...|++.|+.-|=|||+|. ||. T Consensus 175 ~~~~~~~~~ipvia~GGI~t~~d~~~al~~GAd~V~vGsAi~--~p~ 219 (230) T d1yxya1 175 LIEALCKAGIAVIAEGKIHSPEEAKKINDLGVAGIVVGGAIT--RPK 219 (230) T ss_dssp HHHHHHHTTCCEEEESCCCSHHHHHHHHTTCCSEEEECHHHH--CHH T ss_pred HHHHHHCCCCEEEEECCCCCHHHHHHHHHCCCCEEEECHHHC--CHH T ss_conf 999873379829974899999999999986999999892434--989 No 31 >d1juba_ c.1.4.1 (A:) Dihydroorotate dehydrogenase {Lactococcus lactis, isozyme A [TaxId: 1358]} Probab=20.76 E-value=23 Score=13.90 Aligned_cols=44 Identities=23% Similarity=0.304 Sum_probs=30.2 Q ss_pred HHHHHHHHHHCC--CCEECCC--CCH-HHHHHHHHCCCEEEECHHHC--CC Q ss_conf 999999988758--9472247--773-48999980898899711323--89 Q gi|254780801|r 174 FYLLSEIARECK--LTKLSMG--MTR-DFELAIASGATSVRIGSGIF--GE 217 (222) Q Consensus 174 F~~l~~l~~~~~--~~~LSmG--MS~-D~~~Ai~~Gst~vRiGs~iF--G~ 217 (222) ....+++++..+ ++....| +|+ |....+..||+.|-++|+++ |+ T Consensus 229 l~~i~~i~~~~~~~~~Iig~GGI~s~~Da~~~i~aGA~~Vql~tal~~~Gp 279 (311) T d1juba_ 229 LANVRAFYTRLKPEIQIIGTGGIETGQDAFEHLLCGATMLQIGTALHKEGP 279 (311) T ss_dssp HHHHHHHHTTSCTTSEEEEESSCCSHHHHHHHHHHTCSEEEECHHHHHHCT T ss_pred HHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHCCCCCEEEEHHHHHCCH T ss_conf 999999997418973688517838999999999849990365175674091 Done!