RPSBLAST alignment for GI: 254780801 and conserved domain: cd06824

>gnl|CDD|143497 cd06824, PLPDE_III_Yggs_like, Pyridoxal 5-phosphate (PLP)-binding TIM barrel domain of Type III PLP-Dependent Enzymes, Yggs-like proteins. This subfamily contains mainly uncharacterized proteobacterial proteins with similarity to the hypothetical Escherichia coli protein YggS, a homolog of yeast YBL036c, which is homologous to a Pseudomonas aeruginosa gene that is co-transcribed with a known proline biosynthetic gene. Like yeast YBL036c, Yggs is a single domain monomeric protein with a typical TIM-barrel fold. Its structure, which shows a covalently-bound PLP cofactor, is similar to the N-terminal domain of the fold type III PLP-dependent enzymes, bacterial alanine racemase and eukaryotic ornithine decarboxylase, which are two-domain dimeric proteins. YggS has not been characterized extensively and its biological function is still unkonwn. Length = 224
 Score =  167 bits (426), Expect = 2e-42
 Identities = 85/224 (37%), Positives = 112/224 (50%), Gaps = 8/224 (3%)

Query: 2   SLGNKLQVFKQKIENSAILAKRPKDSVSLVAVSKMVDSKKIRVALSCGQVIFAENKLQEA 61
           ++   L   KQ+I  +A  A R   SV L+AVSK   +  IR A + GQ  F EN +QEA
Sbjct: 1   NIAENLAQVKQRIAQAAKQAGRDPSSVQLLAVSKTKPADAIREAYAAGQRHFGENYVQEA 60

Query: 62  KKKWIPLRKEWDVQLRFIGSLQSNKVSEIVSLFDVIETVSREKTASLLSLEMIKQSRFLP 121
            +K   LR   D++  FIG +QSNK   I   FD + +V R K A  L+ +       L 
Sbjct: 61  LEKIEALRDLQDIEWHFIGPIQSNKTKLIAENFDWVHSVDRLKIAKRLNDQRPAGLPPLN 120

Query: 122 VYIQVNTGYEIQKSGIMPNQTKDFVILCRQKYQLNVEGLMCIPPA---MGNPKPHFYLLS 178
           V IQVN   E  KSG+ P    +      Q   L + GLM IP         +  F  L 
Sbjct: 121 VCIQVNISGEDSKSGVAPEDAAELAEAISQLPNLRLRGLMAIPAPTDDEAAQRAAFKRLR 180

Query: 179 EIARECK-----LTKLSMGMTRDFELAIASGATSVRIGSGIFGE 217
           ++  + K     L  LSMGM+ D E AIA+G+T VRIG+ IFG 
Sbjct: 181 QLFDQLKKQYPDLDTLSMGMSGDLEAAIAAGSTMVRIGTAIFGA 224