HHsearch alignment for GI: 254780802 and conserved domain: PRK00133

>PRK00133 metG methionyl-tRNA synthetase; Reviewed.
Probab=100.00  E-value=0  Score=564.74  Aligned_cols=474  Identities=22%  Similarity=0.297  Sum_probs=326.8

Q ss_pred             CCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
Q ss_conf             83899807789789874004779778999999777189855676881402058999999809999999999999999999
Q gi|254780802|r   34 KKYFVLEMFPYPSGNIHMGHLRNYVIGDVVARFMRASGYSVLHPMGWDAFGMPAENAAREHNVHPKMWTYQNIKVMRKQL  113 (869)
Q Consensus        34 ~kf~i~~~pPy~nG~lHiGH~~~~t~~Dv~aRy~rm~G~~Vl~~~G~d~~GlPie~~~~e~~~~~~~~~~~~i~~~k~~~  113 (869)
T Consensus         2 k~~~iTt~ipY~Ng~~HiGH~~~~i~aDv~aRy~Rl~G~~v~f~~GtDeHG~~i~~~A~~~g~tp~e~~d~~~~~~~~~~   81 (666)
T PRK00133          2 RKILVTCALPYANGPIHLGHLLEYIQADIWVRYQRMRGHEVLFVCADDAHGTPIMLKAEKEGITPEELIARYHAEHKRDF   81 (666)
T ss_pred             CCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
T ss_conf             87798179878889843124676999999999998369954984742788489999999859999999999999999999


Q ss_pred             HHCCCEEECCCCEECCCHHHHHHHHHHHHHHHHCCCEEECCEEEECCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCC
Q ss_conf             98191766469821477359999999999999889634122133214776767789898438533456432233475233
Q gi|254780802|r  114 QSIGLSIDWSKDFATCDVDYYHCQQLLFLDFMKHNVIVRKTAQVNWDPVEQTVLANEQVINGRGWRSDAPVEQRSLPQWF  193 (869)
Q Consensus       114 ~~lG~~~DW~r~y~T~d~~y~~~v~w~f~~L~~kGliyrg~~pV~wcp~~~t~la~~Ev~~g~~~~~~~~v~~~~~~~~~  193 (869)
T Consensus        82 ~~l~Is~D--~f~rTt~~~h~~~vq~~f~~l~~~G~iy~~~~~~~Yc~~~e~fl~Dr~V-~GtCP~C~~~~~~GD~----  154 (666)
T PRK00133         82 AGFGISFD--NYGSTHSEENRELAQEIYLKLKENGYIYERTIEQLYDPEKGMFLPDRFV-KGTCPKCGAEDQYGDN----  154 (666)
T ss_pred             HHCCCCCC--CCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEEEEECCCCCCCCCCCEE-EEECCCCCCHHHCCCC----
T ss_conf             98399578--7857898899999999999999789989740355566875655254234-2025777871204874----


Q ss_pred             CCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCEEEEECCCCCC
Q ss_conf             43034445443210022554322222100014557675453555677777751365320013444323200330244320
Q gi|254780802|r  194 FKISDLSQELLDSIETLSEWPEKVKIMQKNWIGRSEGMEIRWEIVSNTIDQIEEILVYTTRPETIFGASFIAIAVDHSIS  273 (869)
Q Consensus       194 ~~~~~~~~~l~~~~~~l~~~p~~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~TtrPeTl~g~~~i~v~~~~~~~  273 (869)
T Consensus       155 ----------------------------------------------------Ce~cG~~~~p------------------  164 (666)
T PRK00133        155 ----------------------------------------------------CEVCGATYSP------------------  164 (666)
T ss_pred             ----------------------------------------------------CCCCCCCCCC------------------
T ss_conf             ----------------------------------------------------2245651673------------------


Q ss_pred             HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCH
Q ss_conf             34541314589998865311112455543025532378610377777415776311234545333222111346721101
Q gi|254780802|r  274 EKLSCDNTDIKEFCDEEKQKGTSLSVLDKTEKKGIYTGIHVKHPLNPNVVIPVYIANFVFMNYGTGAIFGCPFADQRDMD  353 (869)
Q Consensus       274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~P~~~~~~ipv~~~~~V~~~~GTG~V~~~P~h~~~D~~  353 (869)
T Consensus       165 --------------------------------------~eL~~p~~--------------~~~g~~~e~-----------  181 (666)
T PRK00133        165 --------------------------------------TELINPKS--------------AISGATPVL-----------  181 (666)
T ss_pred             --------------------------------------HHHCCCCC--------------CCCCCCCEE-----------
T ss_conf             --------------------------------------44238643--------------457985166-----------


Q ss_pred             HHHCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHH----HHHC
Q ss_conf             221035443210167765554222112101233445830001356466548889999740467752022211----1000
Q gi|254780802|r  354 FAKKYGLPIIPIMKRSINHSQDIEEGKAFSGDGIMINSSFLDGMTNTEALQAVMSHLEKQNIKNSPIGKRKI----NFRL  429 (869)
Q Consensus       354 ~~~k~glpi~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~~~l~~~~~~~~~~~~~~~----~~~l  429 (869)
T Consensus       182 ----------------------~~~-----------e~~f---f~Ls~~~~~L~~~~~~~~~--~~~~~n~~~~~l~~gL  223 (666)
T PRK00133        182 ----------------------KES-----------EHFF---FKLPDFEEFLKEWTRSGAL--QPNVANKMKEWLEEGL  223 (666)
T ss_pred             ----------------------ECC-----------CCHH---HHHHHHHHHHHHHHCCCCC--CHHHHHHHHHHHHCCC
T ss_conf             ----------------------035-----------3333---1387777899875104889--8789999999985788


Q ss_pred             CCCCCCCCCCC-CCCCCCCCCCCCCCEECCCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCC
Q ss_conf             11122112322-22234223334684634742000111001000224542100245642110136764435643234566
Q gi|254780802|r  430 RDWCISRQRSW-GCPIPVIHCQKCGIVELPKEDLPVQLPEDLDFTLPGNPLENHPTWKKIFCVKCGSEALRETDTMDTFV  508 (869)
Q Consensus       430 ~DW~ISRqr~W-G~piPv~~~~~~~~~~~~~~~l~v~~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~~r~~dvld~w~  508 (869)
T Consensus       224 ~D~~ISR~~~W~GipvP~~----~~------------------------------------------------kv~YVW~  251 (666)
T PRK00133        224 QDWDISRDAPYFGFEIPGA----PG------------------------------------------------KVFYVWL  251 (666)
T ss_pred             CCCCEEEECCCCCEECCCC----CC------------------------------------------------EEEEEEE
T ss_conf             7753040278444588898----76------------------------------------------------4899961


Q ss_pred             CCCCCCCCCCCCCCCCCCHHHHHHHCCCHH-----HHCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             643332233555654410135664114334-----401455544332023455532013478732232002222355323
Q gi|254780802|r  509 DSSWYYMRYMTPHAKDPINKELVRQWFPVD-----QYIGGIEHAVLHLLYARFFAHILKKIGYIEIDEPFKRLFTQGMVV  583 (869)
Q Consensus       509 dS~~~~~~~~~~~~~~~~~~e~~~~~~P~D-----~~i~g~d~~~~~~~~~r~~~~~l~~~g~~~~~~pf~~l~~~G~v~  583 (869)
T Consensus       252 DA~igYis~t~~~~--~~~~~~~~~~W~~d~~~~~vhfiGKDi--i~-FH~i~wPa~L~~~g~---~lP-~~v~~hg~l-  321 (666)
T PRK00133        252 DAPIGYISSTKNLC--DKRGLDWDEYWKKDSDTELYHFIGKDI--IY-FHTLFWPAMLEGAGY---RLP-TNVFAHGFL-  321 (666)
T ss_pred             CCCHHHHHHHHHHC--CCCCCCHHHCCCCCCCCCEEEECCCCH--HH-HHHHHHHHHHHHCCC---CCC-CCCCCCCCE-
T ss_conf             56453777644331--435655876388998763367534431--14-647679999984677---888-612114648-


Q ss_pred             CCCCCCCCCCCCEEECCCHHHCCCCCCCCCCCEECCCCEEEECCCCCCHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCC
Q ss_conf             22433235870013062022102567775441104897064047421000000122221001234633566655301332
Q gi|254780802|r  584 HETYYQLEGIKKKYLKPDEVILRNIEGENCAFRLSDNSKVVIGPLEKMSKSKKNVIDPMKVIKSYGADTARLFVLSDSPP  663 (869)
Q Consensus       584 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~g~KMSKSkGNvi~p~~~i~~yGaD~lRl~~~~~~~~  663 (869)
T Consensus       322 -----------------------------------------~~~G~KmSKS~Gnvv~p~~~l~~yg~D~lRY~l~~~~p~  360 (666)
T PRK00133        322 -----------------------------------------TVEGAKMSKSRGTFIWARTYLDHLDPDYLRYYLAAKLPS  360 (666)
T ss_pred             -----------------------------------------EECCEEEECCCCEEEEHHHHHHHCCCCCEEHHHHHCCCC
T ss_conf             -----------------------------------------778806001267176179999866964530203310789


Q ss_pred             C-CCCCCCCCCH---------HHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
Q ss_conf             1-1111343210---------11455677889999976302466789756999999999999999998816889999999
Q gi|254780802|r  664 D-RDIIWSNKGV---------DSTYQFIQQIWRLIYNAKDELQTSSTKKDISLISKSTKFLERIEENYQNLSFNKAVANI  733 (869)
Q Consensus       664 ~-~d~~~s~~~i---------~~~~rfl~kl~~l~~~~~~~~~~~~~~~D~~ils~~~~~i~~v~~~~e~~~f~~ai~~i  733 (869)
T Consensus       361 ~~~D~dfs~~~~~~r~NsdLan~lGNl~~R~~~~~~k~~~g~vp-~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~Al~~i  439 (666)
T PRK00133        361 RIDDIDFNWEDFQQRVNSDLVGKLVNFASRAAGFINKRFDGKLP-DELADPELLEEFRAAAESIAEAYEAREFRKALREI  439 (666)
T ss_pred             CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC-CCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
T ss_conf             87677869999999986888876668999999999986599789-97458999999999999999999810699999999


Q ss_pred             HHHHHHHHHHHHHHCCCCC-----CCCH----HHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCC
Q ss_conf             9999999999986211000-----2217----999999999999997223438999999982899
Q gi|254780802|r  734 HELVNVISKPLMEIAKKKS-----NADR----ISTIRYILEKLIIMMSPMIPHLAEECWQLLGNA  789 (869)
Q Consensus       734 ~~f~n~ls~~y~~~~k~~~-----~~~~----~~~l~~vl~~l~~lLaPi~PhiaEEiw~~Lg~~  789 (869)
T Consensus       440 ~~l~~~~NkYi~~~~PW~L~K~d~~~~~l~~Vl~~~le~lr~laiLL~PfmP~~a~ki~~~Lg~~  504 (666)
T PRK00133        440 MALADRANKYVDDKEPWKLAKQEGEDAALQEVCSVGLNLFRALAIYLKPVLPELAERAEAFLNVE  504 (666)
T ss_pred             HHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCC
T ss_conf             99999998887744876553685668999999999999999999972386737899999980989