HHsearch alignment for GI: 254780802 and conserved domain: PRK00133
>PRK00133 metG methionyl-tRNA synthetase; Reviewed.
Probab=100.00 E-value=0 Score=564.74 Aligned_cols=474 Identities=22% Similarity=0.297 Sum_probs=326.8
Q ss_pred CCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
Q ss_conf 83899807789789874004779778999999777189855676881402058999999809999999999999999999
Q gi|254780802|r 34 KKYFVLEMFPYPSGNIHMGHLRNYVIGDVVARFMRASGYSVLHPMGWDAFGMPAENAAREHNVHPKMWTYQNIKVMRKQL 113 (869)
Q Consensus 34 ~kf~i~~~pPy~nG~lHiGH~~~~t~~Dv~aRy~rm~G~~Vl~~~G~d~~GlPie~~~~e~~~~~~~~~~~~i~~~k~~~ 113 (869)
T Consensus 2 k~~~iTt~ipY~Ng~~HiGH~~~~i~aDv~aRy~Rl~G~~v~f~~GtDeHG~~i~~~A~~~g~tp~e~~d~~~~~~~~~~ 81 (666)
T PRK00133 2 RKILVTCALPYANGPIHLGHLLEYIQADIWVRYQRMRGHEVLFVCADDAHGTPIMLKAEKEGITPEELIARYHAEHKRDF 81 (666)
T ss_pred CCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
T ss_conf 87798179878889843124676999999999998369954984742788489999999859999999999999999999
Q ss_pred HHCCCEEECCCCEECCCHHHHHHHHHHHHHHHHCCCEEECCEEEECCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCC
Q ss_conf 98191766469821477359999999999999889634122133214776767789898438533456432233475233
Q gi|254780802|r 114 QSIGLSIDWSKDFATCDVDYYHCQQLLFLDFMKHNVIVRKTAQVNWDPVEQTVLANEQVINGRGWRSDAPVEQRSLPQWF 193 (869)
Q Consensus 114 ~~lG~~~DW~r~y~T~d~~y~~~v~w~f~~L~~kGliyrg~~pV~wcp~~~t~la~~Ev~~g~~~~~~~~v~~~~~~~~~ 193 (869)
T Consensus 82 ~~l~Is~D--~f~rTt~~~h~~~vq~~f~~l~~~G~iy~~~~~~~Yc~~~e~fl~Dr~V-~GtCP~C~~~~~~GD~---- 154 (666)
T PRK00133 82 AGFGISFD--NYGSTHSEENRELAQEIYLKLKENGYIYERTIEQLYDPEKGMFLPDRFV-KGTCPKCGAEDQYGDN---- 154 (666)
T ss_pred HHCCCCCC--CCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEEEEECCCCCCCCCCCEE-EEECCCCCCHHHCCCC----
T ss_conf 98399578--7857898899999999999999789989740355566875655254234-2025777871204874----
Q ss_pred CCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCEEEEECCCCCC
Q ss_conf 43034445443210022554322222100014557675453555677777751365320013444323200330244320
Q gi|254780802|r 194 FKISDLSQELLDSIETLSEWPEKVKIMQKNWIGRSEGMEIRWEIVSNTIDQIEEILVYTTRPETIFGASFIAIAVDHSIS 273 (869)
Q Consensus 194 ~~~~~~~~~l~~~~~~l~~~p~~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~TtrPeTl~g~~~i~v~~~~~~~ 273 (869)
T Consensus 155 ----------------------------------------------------Ce~cG~~~~p------------------ 164 (666)
T PRK00133 155 ----------------------------------------------------CEVCGATYSP------------------ 164 (666)
T ss_pred ----------------------------------------------------CCCCCCCCCC------------------
T ss_conf ----------------------------------------------------2245651673------------------
Q ss_pred HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCH
Q ss_conf 34541314589998865311112455543025532378610377777415776311234545333222111346721101
Q gi|254780802|r 274 EKLSCDNTDIKEFCDEEKQKGTSLSVLDKTEKKGIYTGIHVKHPLNPNVVIPVYIANFVFMNYGTGAIFGCPFADQRDMD 353 (869)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~P~~~~~~ipv~~~~~V~~~~GTG~V~~~P~h~~~D~~ 353 (869)
T Consensus 165 --------------------------------------~eL~~p~~--------------~~~g~~~e~----------- 181 (666)
T PRK00133 165 --------------------------------------TELINPKS--------------AISGATPVL----------- 181 (666)
T ss_pred --------------------------------------HHHCCCCC--------------CCCCCCCEE-----------
T ss_conf --------------------------------------44238643--------------457985166-----------
Q ss_pred HHHCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHH----HHHC
Q ss_conf 221035443210167765554222112101233445830001356466548889999740467752022211----1000
Q gi|254780802|r 354 FAKKYGLPIIPIMKRSINHSQDIEEGKAFSGDGIMINSSFLDGMTNTEALQAVMSHLEKQNIKNSPIGKRKI----NFRL 429 (869)
Q Consensus 354 ~~~k~glpi~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~~~l~~~~~~~~~~~~~~~----~~~l 429 (869)
T Consensus 182 ----------------------~~~-----------e~~f---f~Ls~~~~~L~~~~~~~~~--~~~~~n~~~~~l~~gL 223 (666)
T PRK00133 182 ----------------------KES-----------EHFF---FKLPDFEEFLKEWTRSGAL--QPNVANKMKEWLEEGL 223 (666)
T ss_pred ----------------------ECC-----------CCHH---HHHHHHHHHHHHHHCCCCC--CHHHHHHHHHHHHCCC
T ss_conf ----------------------035-----------3333---1387777899875104889--8789999999985788
Q ss_pred CCCCCCCCCCC-CCCCCCCCCCCCCCEECCCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCC
Q ss_conf 11122112322-22234223334684634742000111001000224542100245642110136764435643234566
Q gi|254780802|r 430 RDWCISRQRSW-GCPIPVIHCQKCGIVELPKEDLPVQLPEDLDFTLPGNPLENHPTWKKIFCVKCGSEALRETDTMDTFV 508 (869)
Q Consensus 430 ~DW~ISRqr~W-G~piPv~~~~~~~~~~~~~~~l~v~~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~~r~~dvld~w~ 508 (869)
T Consensus 224 ~D~~ISR~~~W~GipvP~~----~~------------------------------------------------kv~YVW~ 251 (666)
T PRK00133 224 QDWDISRDAPYFGFEIPGA----PG------------------------------------------------KVFYVWL 251 (666)
T ss_pred CCCCEEEECCCCCEECCCC----CC------------------------------------------------EEEEEEE
T ss_conf 7753040278444588898----76------------------------------------------------4899961
Q ss_pred CCCCCCCCCCCCCCCCCCHHHHHHHCCCHH-----HHCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 643332233555654410135664114334-----401455544332023455532013478732232002222355323
Q gi|254780802|r 509 DSSWYYMRYMTPHAKDPINKELVRQWFPVD-----QYIGGIEHAVLHLLYARFFAHILKKIGYIEIDEPFKRLFTQGMVV 583 (869)
Q Consensus 509 dS~~~~~~~~~~~~~~~~~~e~~~~~~P~D-----~~i~g~d~~~~~~~~~r~~~~~l~~~g~~~~~~pf~~l~~~G~v~ 583 (869)
T Consensus 252 DA~igYis~t~~~~--~~~~~~~~~~W~~d~~~~~vhfiGKDi--i~-FH~i~wPa~L~~~g~---~lP-~~v~~hg~l- 321 (666)
T PRK00133 252 DAPIGYISSTKNLC--DKRGLDWDEYWKKDSDTELYHFIGKDI--IY-FHTLFWPAMLEGAGY---RLP-TNVFAHGFL- 321 (666)
T ss_pred CCCHHHHHHHHHHC--CCCCCCHHHCCCCCCCCCEEEECCCCH--HH-HHHHHHHHHHHHCCC---CCC-CCCCCCCCE-
T ss_conf 56453777644331--435655876388998763367534431--14-647679999984677---888-612114648-
Q ss_pred CCCCCCCCCCCCEEECCCHHHCCCCCCCCCCCEECCCCEEEECCCCCCHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCC
Q ss_conf 22433235870013062022102567775441104897064047421000000122221001234633566655301332
Q gi|254780802|r 584 HETYYQLEGIKKKYLKPDEVILRNIEGENCAFRLSDNSKVVIGPLEKMSKSKKNVIDPMKVIKSYGADTARLFVLSDSPP 663 (869)
Q Consensus 584 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~g~KMSKSkGNvi~p~~~i~~yGaD~lRl~~~~~~~~ 663 (869)
T Consensus 322 -----------------------------------------~~~G~KmSKS~Gnvv~p~~~l~~yg~D~lRY~l~~~~p~ 360 (666)
T PRK00133 322 -----------------------------------------TVEGAKMSKSRGTFIWARTYLDHLDPDYLRYYLAAKLPS 360 (666)
T ss_pred -----------------------------------------EECCEEEECCCCEEEEHHHHHHHCCCCCEEHHHHHCCCC
T ss_conf -----------------------------------------778806001267176179999866964530203310789
Q ss_pred C-CCCCCCCCCH---------HHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
Q ss_conf 1-1111343210---------11455677889999976302466789756999999999999999998816889999999
Q gi|254780802|r 664 D-RDIIWSNKGV---------DSTYQFIQQIWRLIYNAKDELQTSSTKKDISLISKSTKFLERIEENYQNLSFNKAVANI 733 (869)
Q Consensus 664 ~-~d~~~s~~~i---------~~~~rfl~kl~~l~~~~~~~~~~~~~~~D~~ils~~~~~i~~v~~~~e~~~f~~ai~~i 733 (869)
T Consensus 361 ~~~D~dfs~~~~~~r~NsdLan~lGNl~~R~~~~~~k~~~g~vp-~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~Al~~i 439 (666)
T PRK00133 361 RIDDIDFNWEDFQQRVNSDLVGKLVNFASRAAGFINKRFDGKLP-DELADPELLEEFRAAAESIAEAYEAREFRKALREI 439 (666)
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC-CCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
T ss_conf 87677869999999986888876668999999999986599789-97458999999999999999999810699999999
Q ss_pred HHHHHHHHHHHHHHCCCCC-----CCCH----HHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCC
Q ss_conf 9999999999986211000-----2217----999999999999997223438999999982899
Q gi|254780802|r 734 HELVNVISKPLMEIAKKKS-----NADR----ISTIRYILEKLIIMMSPMIPHLAEECWQLLGNA 789 (869)
Q Consensus 734 ~~f~n~ls~~y~~~~k~~~-----~~~~----~~~l~~vl~~l~~lLaPi~PhiaEEiw~~Lg~~ 789 (869)
T Consensus 440 ~~l~~~~NkYi~~~~PW~L~K~d~~~~~l~~Vl~~~le~lr~laiLL~PfmP~~a~ki~~~Lg~~ 504 (666)
T PRK00133 440 MALADRANKYVDDKEPWKLAKQEGEDAALQEVCSVGLNLFRALAIYLKPVLPELAERAEAFLNVE 504 (666)
T ss_pred HHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCC
T ss_conf 99999998887744876553685668999999999999999999972386737899999980989