HHsearch alignment for GI: 254780802 and conserved domain: PRK00260
>PRK00260 cysS cysteinyl-tRNA synthetase; Validated.
Probab=99.96 E-value=2.2e-26 Score=198.87 Aligned_cols=125 Identities=22% Similarity=0.233 Sum_probs=99.1
Q ss_pred CCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHH
Q ss_conf 88838998077897898740047797789999997771898556768814020589999998099999999999999999
Q gi|254780802|r 32 NKKKYFVLEMFPYPSGNIHMGHLRNYVIGDVVARFMRASGYSVLHPMGWDAFGMPAENAAREHNVHPKMWTYQNIKVMRK 111 (869)
Q Consensus 32 ~~~kf~i~~~pPy~nG~lHiGH~~~~t~~Dv~aRy~rm~G~~Vl~~~G~d~~GlPie~~~~e~~~~~~~~~~~~i~~~k~ 111 (869)
T Consensus 22 ~~v~~Y~C--GPTVYd~~HiG~~r~~v~~D~l~R~l~~~g~~v~~v~NiTDidDKii~~a~~~~~~~~~~~~~~~~~f~~ 99 (460)
T PRK00260 22 GKVKMYVC--GPTVYDYAHIGHARSFVVFDVLRRYLRYRGYKVTYVRNITDIDDKIIKRANEEGESIKELTERYIAAFHE 99 (460)
T ss_pred CEEEEEEC--CCCCCCCCCHHCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHH
T ss_conf 95889967--9848887320003089999999999996499349998237541999999998196999999999999999
Q ss_pred HHHHCCCEEECCCCEECCCHHHHHHHHHHHHHHHHCCCEEECCEEEECCC
Q ss_conf 99981917664698214773599999999999998896341221332147
Q gi|254780802|r 112 QLQSIGLSIDWSKDFATCDVDYYHCQQLLFLDFMKHNVIVRKTAQVNWDP 161 (869)
Q Consensus 112 ~~~~lG~~~DW~r~y~T~d~~y~~~v~w~f~~L~~kGliyrg~~pV~wcp 161 (869)
T Consensus 100 d~~~L~i~~p~~~~r~t---~~i~~~i~~i~~l~~~g~aY~~~~~vyFdv 146 (460)
T PRK00260 100 DMDALGVLRPDIEPRAT---EHIPEIIELIERLIEKGHAYEADGDVYFDV 146 (460)
T ss_pred HHHHHCCCCCCCCCCCC---CCHHHHHHHHHHHHHCCCEEEECCEEEECC
T ss_conf 99994899985224301---479999999999985795288478799635