HHsearch alignment for GI: 254780802 and conserved domain: PRK05347
>PRK05347 glutaminyl-tRNA synthetase; Provisional.
Probab=97.66 E-value=0.00024 Score=47.72 Aligned_cols=96 Identities=18% Similarity=0.342 Sum_probs=65.7
Q ss_pred CCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHH
Q ss_conf 88389980778978987400477977899999977718985567688140205899999980999999999999999999
Q gi|254780802|r 33 KKKYFVLEMFPYPSGNIHMGHLRNYVIGDVVARFMRASGYSVLHPMGWDAFGMPAENAAREHNVHPKMWTYQNIKVMRKQ 112 (869)
Q Consensus 33 ~~kf~i~~~pPy~nG~lHiGH~~~~t~~Dv~aRy~rm~G~~Vl~~~G~d~~GlPie~~~~e~~~~~~~~~~~~i~~~k~~ 112 (869)
T Consensus 26 ~~gkVvtRFpPePnG~LHiGHaka~~lN~~~a~~--y~G~~~L---RfDDTN-------------P~~e~~e~~~~I~~d 87 (556)
T PRK05347 26 KHTKVHTRFPPEPNGYLHIGHAKSICLNFGLAQD--YGGKCNL---RFDDTN-------------PEKEDQEYVDSIKED 87 (556)
T ss_pred CCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHH--CCCEEEE---EECCCC-------------CCCCCHHHHHHHHHH
T ss_conf 7683998049899987618888999866999997--0998999---835899-------------874548999999999
Q ss_pred HHHCCCEEECCCC-EECCC--HHHHHHHHHHHHHHHHCCCEEE
Q ss_conf 9981917664698-21477--3599999999999998896341
Q gi|254780802|r 113 LQSIGLSIDWSKD-FATCD--VDYYHCQQLLFLDFMKHNVIVR 152 (869)
Q Consensus 113 ~~~lG~~~DW~r~-y~T~d--~~y~~~v~w~f~~L~~kGliyr 152 (869)
T Consensus 88 ~~wLg~~--~~~~i~~~Sd~f~~~y~~----a~~LI~~g~AYv 124 (556)
T PRK05347 88 VRWLGFD--WGGELRYASDYFDQLYEY----AVELIKKGKAYV 124 (556)
T ss_pred HHHCCCC--CCCEEEEEHHHHHHHHHH----HHHHHHCCCCEE
T ss_conf 9874998--898278813429999999----999986488135