HHsearch alignment for GI: 254780802 and conserved domain: PRK12418
>PRK12418 cysteinyl-tRNA synthetase; Provisional.
Probab=99.88 E-value=1.3e-20 Score=159.19 Aligned_cols=116 Identities=15% Similarity=0.093 Sum_probs=91.9
Q ss_pred EEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 89980778978987400477977899999977718985567688140205899999980999999999999999999998
Q gi|254780802|r 36 YFVLEMFPYPSGNIHMGHLRNYVIGDVVARFMRASGYSVLHPMGWDAFGMPAENAAREHNVHPKMWTYQNIKVMRKQLQS 115 (869)
Q Consensus 36 f~i~~~pPy~nG~lHiGH~~~~t~~Dv~aRy~rm~G~~Vl~~~G~d~~GlPie~~~~e~~~~~~~~~~~~i~~~k~~~~~ 115 (869)
T Consensus 10 V~mY~CGPTVYd~~HiGhaRt~v~fD~l~R~L~~~gy~V~~v~NiTDVDDKii~~A~~~g~~~~ela~~~~~~f~~d~~~ 89 (384)
T PRK12418 10 ATMYVCGITPYDATHLGHAATYLAFDLVQRVWLDAGHDVHYVQNVTDVDDPLLERAARDGVDWRDLAAREIALFREDMAA 89 (384)
T ss_pred EEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
T ss_conf 89996688688885423351689999999999980996499981050638999999985939999999999999999998
Q ss_pred CCCEEECCCCEECCCHHHHHHHHHHHHHHHHCCCEEECC
Q ss_conf 191766469821477359999999999999889634122
Q gi|254780802|r 116 IGLSIDWSKDFATCDVDYYHCQQLLFLDFMKHNVIVRKT 154 (869)
Q Consensus 116 lG~~~DW~r~y~T~d~~y~~~v~w~f~~L~~kGliyrg~ 154 (869)
T Consensus 90 Lnv~~p~~~---praTe~I~~ii~~I~~Li~~G~AY~~~ 125 (384)
T PRK12418 90 LRVLPPRDY---VGAVESIPEVVELVEKLLASGAAYVVD 125 (384)
T ss_pred CCCCCCCEE---CCCCCCHHHHHHHHHHHHHCCCEEECC
T ss_conf 299999500---321137999999999999679557756