HHsearch alignment for GI: 254780802 and conserved domain: PRK13208
>PRK13208 valS valyl-tRNA synthetase; Reviewed.
Probab=100.00 E-value=0 Score=1233.33 Aligned_cols=640 Identities=28% Similarity=0.484 Sum_probs=516.3
Q ss_pred CCCCCHHHHHHHHHHHHHHCCCCCC-CCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
Q ss_conf 8765689998999999998598036-767888838998077897898740047797789999997771898556768814
Q gi|254780802|r 3 TRSYSPQETDSIWQSAWYDSNIFKA-ENGKNKKKYFVLEMFPYPSGNIHMGHLRNYVIGDVVARFMRASGYSVLHPMGWD 81 (869)
Q Consensus 3 ~~~y~~~~iE~kwq~~W~~~~~fe~-~~~~~~~kf~i~~~pPy~nG~lHiGH~~~~t~~Dv~aRy~rm~G~~Vl~~~G~d 81 (869)
T Consensus 6 ~~~y~~~~iE~k~~~~W~~~~~f~~~~~~~~~~~f~i~~ppPy~nG~lHiGH~~~~t~~D~~~Ry~rm~G~~Vl~~~G~D 85 (809)
T PRK13208 6 PKKYDPKEIEEKWQKIWEEEGIYKFDDEDEKKPVYIIDTPPPTVSGKLHIGHVFSYTHTDFIARYQRMRGYNVFFPQGWD 85 (809)
T ss_pred CCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
T ss_conf 57899499999999999867993678666899969990699998897213166889999999999981799669988458
Q ss_pred CCCHHHHHHHHHH-CC------------CHHHHHHHHHHHHHHHHHHCCCEEECCCCEECCCHHHHHHHHHHHHHHHHCC
Q ss_conf 0205899999980-99------------9999999999999999998191766469821477359999999999999889
Q gi|254780802|r 82 AFGMPAENAAREH-NV------------HPKMWTYQNIKVMRKQLQSIGLSIDWSKDFATCDVDYYHCQQLLFLDFMKHN 148 (869)
Q Consensus 82 ~~GlPie~~~~e~-~~------------~~~~~~~~~i~~~k~~~~~lG~~~DW~r~y~T~d~~y~~~v~w~f~~L~~kG 148 (869)
T Consensus 86 ~~GlPie~~vek~~~~~~~~~~~~~f~~~c~~~~~~~~~~~~~~~~~lG~s~Dw~r~~~T~d~~y~~~v~~~f~~L~~~G 165 (809)
T PRK13208 86 DNGLPTERKVEKYYGIRAHDISREEFIELCRELTDEDEEKFRELWRRLGLSVDWSLEYRTISPEYRRISQKSFLDLYKKG 165 (809)
T ss_pred CCCHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCC
T ss_conf 56689999999971999012799999999999999999999999998286140689707588789999999999999779
Q ss_pred CEEECCEEEECCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 63412213321477676778989843853345643223347523343034445443210022554322222100014557
Q gi|254780802|r 149 VIVRKTAQVNWDPVEQTVLANEQVINGRGWRSDAPVEQRSLPQWFFKISDLSQELLDSIETLSEWPEKVKIMQKNWIGRS 228 (869)
Q Consensus 149 liyrg~~pV~wcp~~~t~la~~Ev~~g~~~~~~~~v~~~~~~~~~~~~~~~~~~l~~~~~~l~~~p~~v~~~~~~~i~~~ 228 (869)
T Consensus 166 liy~g~~~v~wcp~~~T~ls~~Ev~~~~~~----------~~~------------------------------------- 198 (809)
T PRK13208 166 LIYRAEAPVLWCPRCRTAIAQAEVEYKERE----------GKL------------------------------------- 198 (809)
T ss_pred CEEEECCCCCCCCCCCCCHHHHHHHCCCCC----------CEE-------------------------------------
T ss_conf 978742103677665755565676425677----------603-------------------------------------
Q ss_pred CCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCEEEEECCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf 67545355567777775136532001344432320033024432034541314589998865311112455543025532
Q gi|254780802|r 229 EGMEIRWEIVSNTIDQIEEILVYTTRPETIFGASFIAIAVDHSISEKLSCDNTDIKEFCDEEKQKGTSLSVLDKTEKKGI 308 (869)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~l~~~TtrPeTl~g~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (869)
T Consensus 199 --~~ikf~~~~----~~~~l~iaTTrPeTl~~~~av~v~P~d~ry---------------------------------~~ 239 (809)
T PRK13208 199 --NYIKFPVKE----GGEKITIATTRPELLPACVAVVVHPDDERY---------------------------------KH 239 (809)
T ss_pred --EEEEEEECC----CCCEEEEEECCHHHHHHHHCEEECCCCHHH---------------------------------HH
T ss_conf --999888517----986489995782376530204106885788---------------------------------98
Q ss_pred CCCCEECCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCC
Q ss_conf 37861037777741577631123454533322211134672110122103544321016776555422211210123344
Q gi|254780802|r 309 YTGIHVKHPLNPNVVIPVYIANFVFMNYGTGAIFGCPFADQRDMDFAKKYGLPIIPIMKRSINHSQDIEEGKAFSGDGIM 388 (869)
Q Consensus 309 ~~G~~~~~P~~~~~~ipv~~~~~V~~~~GTG~V~~~P~h~~~D~~~~~k~glpi~~v~~~~~~~~~~~~~~~~~~~~~~~ 388 (869)
T Consensus 240 l~G~~~~~P~~~~-~vpi~~~~~V~~~~GTG~V~~~p~~d~~D~~~~~~~~l~~~~~id~~G~~~~~------------- 305 (809)
T PRK13208 240 LVGKTAIVPLFGV-EVPILADPLVDPDFGTGAVMICTFGDQTDVTWWRELNLPLRIIIDEDGRITEA------------- 305 (809)
T ss_pred HCCCEEECCCCCC-EEEEEEEEEEECCCCCCCEEECCCCCCHHHEEHHHCCCCCEEEECCCCCCCCC-------------
T ss_conf 4598897168896-66786346650467878356678987303302443055630003778724246-------------
Q ss_pred CCCHHHCCCCHHHHHHHHHHHHHHHCCC-----------C------------------------------------CCH-
Q ss_conf 5830001356466548889999740467-----------7------------------------------------520-
Q gi|254780802|r 389 INSSFLDGMTNTEALQAVMSHLEKQNIK-----------N------------------------------------SPI- 420 (869)
Q Consensus 389 ~~~~~~~g~~~~~~~~~i~~~l~~~~~~-----------~------------------------------------~~~- 420 (869)
T Consensus 306 --~~~~~G~~v~ea~~~ii~~L~~~g~l~~~~~~~h~~p~c~R~~~pi~~~~~~QWfi~~~~~k~~~~~~~~~i~~~P~~ 383 (809)
T PRK13208 306 --AGKYAGLTIKEARKKIIEDLKEEGLLVKQEPITHNVKVCERCKTPIEILVTRQWFIKVLDLKEELLERAKEIEWYPEH 383 (809)
T ss_pred --CCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEECCCCCCCEEEECHHHHHHHHHHHHHHHHHHHCCEECCCH
T ss_conf --634599689998999999999689941344554556411478972168752456653277788888764226005840
Q ss_pred HHHHHHH---HCC-CCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCC
Q ss_conf 2221110---001-112211232222234223334684634742000111001000224542100245642110136764
Q gi|254780802|r 421 GKRKINF---RLR-DWCISRQRSWGCPIPVIHCQKCGIVELPKEDLPVQLPEDLDFTLPGNPLENHPTWKKIFCVKCGSE 496 (869)
Q Consensus 421 ~~~~~~~---~l~-DW~ISRqr~WG~piPv~~~~~~~~~~~~~~~l~v~~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~ 496 (869)
T Consensus 384 ~~~r~~~wl~~~~~DW~iSRqr~WGtpiPiw~~~~~~~~~~~~------~~~~~~--l~~d~~~~~~~~~~~~~~~~~~~ 455 (809)
T PRK13208 384 MRKRLENWIEGLNWDWCISRQRYFGTPIPVWYCKDCGGEGKPI------LADEED--LPVDPTKDPPPGYSECCRCGPGE 455 (809)
T ss_pred HHHHHHHHHHCCCCCCCEEECCCCCCCCCEEEECCCCCCCCCC------CCCHHH--CCCCCHHCCCCHHHCCCCCCCCC
T ss_conf 8889999984256542000012358644247605778756401------487887--37781101741110246668766
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCC
Q ss_conf 43564323456664333223355565441013566411433440145554433202345553201347873223200222
Q gi|254780802|r 497 ALRETDTMDTFVDSSWYYMRYMTPHAKDPINKELVRQWFPVDQYIGGIEHAVLHLLYARFFAHILKKIGYIEIDEPFKRL 576 (869)
Q Consensus 497 ~~r~~dvld~w~dS~~~~~~~~~~~~~~~~~~e~~~~~~P~D~~i~g~d~~~~~~~~~r~~~~~l~~~g~~~~~~pf~~l 576 (869)
T Consensus 456 ~~~e~dvlD~WfdS~~~p~~~~~~----~~~~~~f~~~~P~d~~~~G~Di~r~W~~~~l~~~~------~l~~~~Pfk~v 525 (809)
T PRK13208 456 FEPETDVMDTWADSSITPLIVTGW----LEDKELFEKLFPADLRPQGHDIIRTWLFYTILRAY------LLTGKLPWKNI 525 (809)
T ss_pred CEECCCCCCCEEECCCCHHHHCCC----CCCHHHHHHCCCCCEEECHHHHHHHHHHHHHHHHH------HHCCCCCCHHC
T ss_conf 330476666465567788876056----32156675448852443405988739999999999------85388860201
Q ss_pred CCCCCCCCCCCCCCCCCCCEEECCCHHHCCCCCCCCCCCEECCCCEEEECCCCCCHHHCCCCCCCCCCCCCCCHHHHHHH
Q ss_conf 23553232243323587001306202210256777544110489706404742100000012222100123463356665
Q gi|254780802|r 577 FTQGMVVHETYYQLEGIKKKYLKPDEVILRNIEGENCAFRLSDNSKVVIGPLEKMSKSKKNVIDPMKVIKSYGADTARLF 656 (869)
Q Consensus 577 ~~~G~v~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~g~KMSKSkGNvi~p~~~i~~yGaD~lRl~ 656 (869)
T Consensus 526 ~~~G~vld~-----------------------------------------~G~KMSKS~GNvi~p~eii~~yGADalR~~ 564 (809)
T PRK13208 526 MISGMVLDP-----------------------------------------DGKKMSKSKGNVVDPEELLEKYGADAVRYW 564 (809)
T ss_pred CCCCEEECC-----------------------------------------CCCCCCCCCCCCCCHHHHHHHCCCHHHHHH
T ss_conf 114605546-----------------------------------------774347778896897898653380999999
Q ss_pred HHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCC--------CCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHH
Q ss_conf 5301332111113432101145567788999997630246--------67897569999999999999999988168899
Q gi|254780802|r 657 VLSDSPPDRDIIWSNKGVDSTYQFIQQIWRLIYNAKDELQ--------TSSTKKDISLISKSTKFLERIEENYQNLSFNK 728 (869)
Q Consensus 657 ~~~~~~~~~d~~~s~~~i~~~~rfl~kl~~l~~~~~~~~~--------~~~~~~D~~ils~~~~~i~~v~~~~e~~~f~~ 728 (869)
T Consensus 565 la-~~~~~~d~~~~~~~~~~~~~~~~klwN~~rf~~~~~~~~~~~~~~~~~~~lDrwils~l~~~i~~v~~~~e~y~f~~ 643 (809)
T PRK13208 565 AA-NSRLGSDTRFSEKQIKIGKRLLTKLWNASRFVSSFIEPEKIEEKAPILEPVDRWILAKLNRVVKKATEALENYDFAE 643 (809)
T ss_pred HH-CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHH
T ss_conf 96-18944465668999999999999999999999970354566676322578899999999999999999997358999
Q ss_pred HHHHHHHHH-HHHHHHHHHHCCCCCCCC--------HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCEEECCCCC
Q ss_conf 999999999-999999986211000221--------79999999999999972234389999999828998355178866
Q gi|254780802|r 729 AVANIHELV-NVISKPLMEIAKKKSNAD--------RISTIRYILEKLIIMMSPMIPHLAEECWQLLGNAGLVAQQKWPK 799 (869)
Q Consensus 729 ai~~i~~f~-n~ls~~y~~~~k~~~~~~--------~~~~l~~vl~~l~~lLaPi~PhiaEEiw~~Lg~~~~i~~~~WP~ 799 (869)
T Consensus 644 a~~~i~~F~~~~l~~~Yie~~k~R~~~~~~~~~~~~a~~tL~~vL~~~l~llaP~~PfiaEeiw~~L~~~~sV~~~~wP~ 723 (809)
T PRK13208 644 ALEEIESFFWHDFCDNYLELVKSRAYGEDGSEEQKSAIYTLYTVLRTLLKLLAPFMPFITEEIYSWLYGGSSVHRASWPE 723 (809)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCC
T ss_conf 99999999999878999999889871488818899999999999999999998788999999998689998188579999
Q ss_pred CCHHH
Q ss_conf 59678
Q gi|254780802|r 800 LDPIL 804 (869)
Q Consensus 800 ~d~~~ 804 (869)
T Consensus 724 ~~~~~ 728 (809)
T PRK13208 724 VDELL 728 (809)
T ss_pred CCCCC
T ss_conf 98200