HHsearch alignment for GI: 254780802 and conserved domain: cd00802
>cd00802 class_I_aaRS_core Class I amino acyl-tRNA synthetase (aaRS) catalytic core domain. These enzymes are mostly monomers, which aminoacylate the 2'-OH of the nucleotide at the 3' of the appropriate tRNA. The core domain is based on the Rossman fold and is responsible for the ATP-dependent formation of the enzyme bound aminoacyl-adenylate. It contains the characteristic class I HIGH and KMSKS motifs, which are involved in ATP binding.
Probab=97.06 E-value=0.00026 Score=47.52 Aligned_cols=63 Identities=21% Similarity=0.354 Sum_probs=38.1
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 23456664333223355565441013566411433440145554433202345553201347873223200222235532
Q gi|254780802|r 503 TMDTFVDSSWYYMRYMTPHAKDPINKELVRQWFPVDQYIGGIEHAVLHLLYARFFAHILKKIGYIEIDEPFKRLFTQGMV 582 (869)
Q Consensus 503 vld~w~dS~~~~~~~~~~~~~~~~~~e~~~~~~P~D~~i~g~d~~~~~~~~~r~~~~~l~~~g~~~~~~pf~~l~~~G~v 582 (869)
T Consensus 71 ~~~y~~~~~~~~~~~~~~------------~~~~~~~~~~G~D~~~-~~~~~~~~~~~l~~------~~~~~~~~~~~~l 131 (142)
T cd00802 71 DLKYWFDSAADDLLLLGY------------PFYPVDLVLGGKDQIP-HLELTRDLLKALGG------KFPPPEVLHHGLL 131 (142)
T ss_pred HCEECCCEEECHHHHCCC------------CCCCCCEEEECCCCCC-CCHHHHHHHHHHCC------CCCCCCEEEEEEE
T ss_conf 652634016434875466------------7887657886621014-76999999998377------8899867863114
Q ss_pred CC
Q ss_conf 32
Q gi|254780802|r 583 VH 584 (869)
Q Consensus 583 ~~ 584 (869)
T Consensus 132 ~~ 133 (142)
T cd00802 132 LG 133 (142)
T ss_pred EC
T ss_conf 88