HHsearch alignment for GI: 254780802 and conserved domain: pfam09334
>pfam09334 tRNA-synt_1g tRNA synthetases class I (M). This family includes methionyl tRNA synthetases.
Probab=100.00 E-value=0 Score=508.27 Aligned_cols=376 Identities=20% Similarity=0.285 Sum_probs=253.7
Q ss_pred EEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 89980778978987400477977899999977718985567688140205899999980999999999999999999998
Q gi|254780802|r 36 YFVLEMFPYPSGNIHMGHLRNYVIGDVVARFMRASGYSVLHPMGWDAFGMPAENAAREHNVHPKMWTYQNIKVMRKQLQS 115 (869)
Q Consensus 36 f~i~~~pPy~nG~lHiGH~~~~t~~Dv~aRy~rm~G~~Vl~~~G~d~~GlPie~~~~e~~~~~~~~~~~~i~~~k~~~~~ 115 (869)
T Consensus 1 ~~I~~ppP~~nG~lHiGHa~~~~~~Dvl~R~~r~~G~~V~~v~g~D~~g~~i~~ka~~~g~~~~e~~~~y~~~~~~~~~~ 80 (388)
T pfam09334 1 FLITTALPYVNGPPHIGHLYTTIPADVYARYLRLRGYDVLFVTGTDEHGTKIELAAEKEGVTPQELVDRYHEEFKELFKK 80 (388)
T ss_pred CEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 98937898888860022418899999999999956997071386485379999999984999999999999999999998
Q ss_pred CCCEEECCCCEECCCHHHHHHHHHHHHHHHHCCCEEECCEEEECCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 19176646982147735999999999999988963412213321477676778989843853345643223347523343
Q gi|254780802|r 116 IGLSIDWSKDFATCDVDYYHCQQLLFLDFMKHNVIVRKTAQVNWDPVEQTVLANEQVINGRGWRSDAPVEQRSLPQWFFK 195 (869)
Q Consensus 116 lG~~~DW~r~y~T~d~~y~~~v~w~f~~L~~kGliyrg~~pV~wcp~~~t~la~~Ev~~g~~~~~~~~v~~~~~~~~~~~ 195 (869)
T Consensus 81 lgi~~--D~~~~t~~~~~~~~v~~~f~~L~~~G~iy~~~~~~~y~~~~~~~l~d~~v~-g~cp~~~~~~~~~~------- 150 (388)
T pfam09334 81 FNISF--DDFIRTTSERHKELVQEFFLKLYEKGDIYEGEYEGWYCVSDERFLPDRYVE-GTCPYCGSEDARGD------- 150 (388)
T ss_pred HCCCC--CCCCCCCCHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCHHHHC-CCCCCCCCCCCCCC-------
T ss_conf 39967--878657984689999999875140681553241122366666666533307-54575575013664-------
Q ss_pred HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCEEEEECCCCCCHH
Q ss_conf 03444544321002255432222210001455767545355567777775136532001344432320033024432034
Q gi|254780802|r 196 ISDLSQELLDSIETLSEWPEKVKIMQKNWIGRSEGMEIRWEIVSNTIDQIEEILVYTTRPETIFGASFIAIAVDHSISEK 275 (869)
Q Consensus 196 ~~~~~~~l~~~~~~l~~~p~~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~TtrPeTl~g~~~i~v~~~~~~~~~ 275 (869)
T Consensus 151 -------------------------------------------------~~e~~----------G~-------------- 157 (388)
T pfam09334 151 -------------------------------------------------QCEVC----------GR-------------- 157 (388)
T ss_pred -------------------------------------------------HHHCC----------CC--------------
T ss_conf -------------------------------------------------10023----------88--------------
Q ss_pred HHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHH
Q ss_conf 54131458999886531111245554302553237861037777741577631123454533322211134672110122
Q gi|254780802|r 276 LSCDNTDIKEFCDEEKQKGTSLSVLDKTEKKGIYTGIHVKHPLNPNVVIPVYIANFVFMNYGTGAIFGCPFADQRDMDFA 355 (869)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~P~~~~~~ipv~~~~~V~~~~GTG~V~~~P~h~~~D~~~~ 355 (869)
T Consensus 158 --------------------~~e~~------------~~~~~~~--------------~~~~~----------------- 174 (388)
T pfam09334 158 --------------------PLEPT------------ELINPRS--------------AISGS----------------- 174 (388)
T ss_pred --------------------CCCHH------------HHCCCCC--------------CCCCC-----------------
T ss_conf --------------------27867------------7417644--------------46799-----------------
Q ss_pred HCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHH----HHHCCC
Q ss_conf 1035443210167765554222112101233445830001356466548889999740467752022211----100011
Q gi|254780802|r 356 KKYGLPIIPIMKRSINHSQDIEEGKAFSGDGIMINSSFLDGMTNTEALQAVMSHLEKQNIKNSPIGKRKI----NFRLRD 431 (869)
Q Consensus 356 ~k~glpi~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~~~l~~~~~~~~~~~~~~~----~~~l~D 431 (869)
T Consensus 175 -----~~~-------------------------~~~~~~~f~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~wl~~~l~D 224 (388)
T pfam09334 175 -----TPE-------------------------LKEEEHYFFRLSKFQDKLLEWIKENPDEPPSNVNEVVLSWLKEGLKD 224 (388)
T ss_pred -----CCE-------------------------EECCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCC
T ss_conf -----754-------------------------43244123306889999999995499889889999999998668887
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 12211232222234223334684634742000111001000224542100245642110136764435643234566643
Q gi|254780802|r 432 WCISRQRSWGCPIPVIHCQKCGIVELPKEDLPVQLPEDLDFTLPGNPLENHPTWKKIFCVKCGSEALRETDTMDTFVDSS 511 (869)
Q Consensus 432 W~ISRqr~WG~piPv~~~~~~~~~~~~~~~l~v~~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~~r~~dvld~w~dS~ 511 (869)
T Consensus 225 w~ISR~~~WG~~iP~~--~--------------------------------------------------~~~~~vW~da~ 252 (388)
T pfam09334 225 LSITRDLDWGIPVPGD--P--------------------------------------------------GKVIYVWFDAL 252 (388)
T ss_pred CCCCCCCCCCCCCCCC--C--------------------------------------------------CEEEEEECCCC
T ss_conf 6441247787504888--9--------------------------------------------------80687723565
Q ss_pred CCCCCCCCCCCCCCCHHHHHHHCCCHH-----HHCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 332233555654410135664114334-----401455544332023455532013478732232002222355323224
Q gi|254780802|r 512 WYYMRYMTPHAKDPINKELVRQWFPVD-----QYIGGIEHAVLHLLYARFFAHILKKIGYIEIDEPFKRLFTQGMVVHET 586 (869)
Q Consensus 512 ~~~~~~~~~~~~~~~~~e~~~~~~P~D-----~~i~g~d~~~~~~~~~r~~~~~l~~~g~~~~~~pf~~l~~~G~v~~~~ 586 (869)
T Consensus 253 ~~~~~~~~~~---~~~~~~~~~~w~~~~~~~~i~~~G~Di~~fh---~~~~~a~~~~~~~----~~~~~~~~~g~v~--- 319 (388)
T pfam09334 253 IGYISATKYL---SGNPEKWKKFWADDPDTEIVHFIGKDIIRFH---AIYWPAMLMAAGL----PLPTQVFAHGWLT--- 319 (388)
T ss_pred CCCCCCCCCC---CCCHHHHHHHCCCCCCCEECCCCCCCCCCHH---HHHHHHHHHHCCC----CCCCEEEEEEEEE---
T ss_conf 5520002777---7781788864436776200010676414201---7899999983899----9886678757997---
Q ss_pred CCCCCCCCCEEECCCHHHCCCCCCCCCCCEECCCCEEEECCCCCCHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCC
Q ss_conf 33235870013062022102567775441104897064047421000000122221001234633566655301332111
Q gi|254780802|r 587 YYQLEGIKKKYLKPDEVILRNIEGENCAFRLSDNSKVVIGPLEKMSKSKKNVIDPMKVIKSYGADTARLFVLSDSPPDRD 666 (869)
Q Consensus 587 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~g~KMSKSkGNvi~p~~~i~~yGaD~lRl~~~~~~~~~~d 666 (869)
T Consensus 320 ---------------------------------------~~G~KMSKSlGN~i~~~d~i~~ygaDalR~~L~~~~~~~~d 360 (388)
T pfam09334 320 ---------------------------------------VEGGKMSKSRGNVVDPDELLDRYGVDALRYYLAREAPEGKD 360 (388)
T ss_pred ---------------------------------------ECCEECCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCC
T ss_conf ---------------------------------------59944478699878889999887828999999953999899
Q ss_pred CCCCCCCHHHHHH--HHHHHHHHHHHH
Q ss_conf 1134321011455--677889999976
Q gi|254780802|r 667 IIWSNKGVDSTYQ--FIQQIWRLIYNA 691 (869)
Q Consensus 667 ~~~s~~~i~~~~r--fl~kl~~l~~~~ 691 (869)
T Consensus 361 ~~Fs~~~~~~~~n~~~~~kl~N~~~r~ 387 (388)
T pfam09334 361 GDFSWEDFVERVNSELANDLGNLVNRT 387 (388)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 989999999998799888776577330