HHsearch alignment for GI: 254780803 and conserved domain: COG5468
>COG5468 Predicted secreted (periplasmic) protein [Function unknown].
Probab=99.93 E-value=7.4e-24 Score=165.44 Aligned_cols=160 Identities=21% Similarity=0.352 Sum_probs=135.4
Q ss_pred HHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCEEEEEEEEECCCCHHHHHHHHHHHHHCCCCC--C-CCCEEEEEEECC
Q ss_conf 7889999999999998368514334157767202232578407774144899999997314777--7-671689997100
Q gi|254780803|r 4 KRILRILVVFNFFLLINSCSVYPFYYLKNQDRTEYIHPIKVLVVSKNNKNEIYRSINFLTSTVR--T-KNLYQLEVNIDS 80 (165)
Q Consensus 4 ~ri~k~l~~~~~~~~ls~CGf~PlY~~~~~~~~~~l~~I~i~~~~~r~~~~i~n~L~~~~~~~~--~-~~~y~l~i~~~~ 80 (165)
T Consensus 2 ~r~l~~va~a~S~~~l~~C~v~PLYsg~~a~~~~~LAsI~i~~a~~r~gqevRnqLifl~s~gaGePA~p~y~Lsl~vs~ 81 (172)
T COG5468 2 KRTLARVALAFSLATLTACQVRPLYSGERAGTESGLASIEISPAGGRGGQEVRNQLIFLFSGGAGEPANPQYYLSLSVSR 81 (172)
T ss_pred HHHHHHHHHHHHHHHHHCCEEEECCCCCCCCHHCCEEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEE
T ss_conf 01899999999999863114554135787530102026787426765889999999999616899988821689987431
Q ss_pred CEEECC--C-----CCCCCCEEEEEEEEEEEEEECCCCCEEEEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 000000--2-----467650489999999999980589587742579998606776157799999999999999999999
Q gi|254780803|r 81 FTDHAI--S-----NAFFKNIGRITLKAKYYFKEISGKNILYENNTDVTSLFDFSDQQFSQLRSHKSSEEKAIQELSENI 153 (165)
Q Consensus 81 ~~~~~i--~-----~~~~~~~~~~~~~~~y~L~~~~~~~~i~~~~~~~~~~Y~~~~~~f~~~~~e~~a~erl~~~lae~I 153 (165)
T Consensus 82 ~a~~~~~~nv~~~~d~d~p~ag~v~mt~~y~Ltdak~G~~v~~Grr~vtas~D~p~QefA~irA~rDaenRAArElAe~i 161 (172)
T COG5468 82 FARGVRLVNVGNDTDRDRPSAGRVVMTADYVLTDAKDGAEVHKGRRSVTASFDRPRQEFAKIRAQRDAENRAARELAEII 161 (172)
T ss_pred EEEEEEEEECCCCCCCCCCCCCEEEEEEEEEEEECCCCCEEEECCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 03457887405655578987757999865898754788776524315788734751478888887606778999999999
Q ss_pred HHHHHHHHHC
Q ss_conf 9999999740
Q gi|254780803|r 154 YIDIISFIRT 163 (165)
Q Consensus 154 ~~~i~~~l~~ 163 (165)
T Consensus 162 ~ldlA~~L~r 171 (172)
T COG5468 162 QLDLAAWLGR 171 (172)
T ss_pred HHHHHHHHHC
T ss_conf 8899999635