HHsearch alignment for GI: 254780803 and conserved domain: PRK13731

>PRK13731 conjugal transfer surface exclusion protein TraT; Provisional.
Probab=90.63  E-value=0.67  Score=25.15  Aligned_cols=78  Identities=17%  Similarity=0.211  Sum_probs=39.5

Q ss_pred             CCHHHHHHHHHHHHHHHHHHCCCCEE-EEECCCCCCCEEE-EEEEEECCC------------C----HHHHHHHHHHHHH
Q ss_conf             91578899999999999983685143-3415776720223-257840777------------4----1448999999973
Q gi|254780803|r    1 MLYKRILRILVVFNFFLLINSCSVYP-FYYLKNQDRTEYI-HPIKVLVVS------------K----NNKNEIYRSINFL   62 (165)
Q Consensus         1 ml~~ri~k~l~~~~~~~~ls~CGf~P-lY~~~~~~~~~~l-~~I~i~~~~------------~----r~~~~i~n~L~~~   62 (165)
T Consensus         1 m~~kk~~~~~~~-~~~l~lsGC~a~~tai~krnL~VqTkMS~TIfLdP~s~ktVyv~vrNTS~~~~~~l~~~i~~~L~ak   79 (243)
T PRK13731          1 MKTKKLMMVALV-SSTLALSGCGAMSTAIKKRNLEVKTQMSETIWLEPASERTVFLQIKNTSDKDMSGLQGKIADAVKAK   79 (243)
T ss_pred             CCHHHHHHHHHH-HHHHHHCCHHHHHHHHHHCCCCEECEECCCEEECCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHC
T ss_conf             933775799999-9999971568767787735752222000438866854557999985178772456789999999858


Q ss_pred             C---CCCCCCCCEEEEEEEC
Q ss_conf             1---4777767168999710
Q gi|254780803|r   63 T---STVRTKNLYQLEVNID   79 (165)
Q Consensus        63 ~---~~~~~~~~y~l~i~~~   79 (165)
T Consensus        80 GY~iv~~P~~A~Y~LQaNVL   99 (243)
T PRK13731         80 GYQVVTSPDKAYYWIQANVL   99 (243)
T ss_pred             CEEEECCHHHCEEEEEEEEH
T ss_conf             90986786576077274240