HHsearch alignment for GI: 254780804 and conserved domain: PRK05648
>PRK05648 DNA polymerase III subunits gamma and tau; Reviewed.
Probab=99.67 E-value=1.2e-12 Score=102.84 Aligned_cols=303 Identities=10% Similarity=0.074 Sum_probs=225.0
Q ss_pred HHHHCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCC---CC---------------CEEEEEEHHH--HHCCHHHHHHHH
Q ss_conf 001013847999569965899999999997335666---77---------------3077620889--641899999987
Q gi|254780804|r 15 KNLFLSHFVFIFYGSDKGLIFELINQFKKNISITYH---DP---------------FSLVVLNALE--IQKNISTFWNEI 74 (352)
Q Consensus 15 ~~~~~~~~iyLi~G~d~~l~~~~~~~l~k~~~~~~~---~~---------------~~~~~~~~~e--~~~d~~~l~~~~ 74 (352)
T Consensus 33 ~~~~~~~-a~l~~g~rg~gkt~~ar~~ak~lnc~~~~~~~pc~~c~~c~~i~~~~~~d~~e~d~as~~~v~~~r~~~~~~ 111 (705)
T PRK05648 33 DNQRLHH-AYLFTGTRGVGKTTIARIIAKCLNCETGVSSTPCGECSVCREIDEGRFVDLIEVDAASRTKVEDTRELLDNV 111 (705)
T ss_pred HCCCCCC-EEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHHHHC
T ss_conf 7098630-465007898889899999999867789998897877600466624897763445155447889999999855
Q ss_pred HCCCCCCCCEEEEEECCCC-HHHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHH
Q ss_conf 1788888823999847741-045789889885105656079998526543113566765431121014664420013588
Q gi|254780804|r 75 NSTSLFSKKKIILIENLST-EKKVLDCLEEIIIKNICNHIIIIKSNEIKKNNTLRKIAEKFTSVLAISCYPDNKIHLMDL 153 (352)
Q Consensus 75 ~t~slF~~~klIii~~~~~-~k~~~~~l~~~~~~~~~~~~li~~a~~l~k~~kl~k~~e~~~~~~~v~~~~~~~~~l~~~ 153 (352)
T Consensus 112 ~~~p~~~~~kv~~idevhmls~~~fnallktleepp~~v~f~~att~~~k---~p~t~--~src~~~~~~~~~~~~~~~~ 186 (705)
T PRK05648 112 QYAPTRGRYKVYLIDEVHMLSSHSFNALLKTLEEPPPHVKFLLATTDPQK---LPVTI--LSRCLQFSLKNMSPERVVEH 186 (705)
T ss_pred CCCCCCCCEEEEEEEHHHHCCHHHHHHHHHHCCCCCCCEEEEEECCCHHH---CCHHH--HHHHHHCCCCCCCHHHHHHH
T ss_conf 51776774579998426541799999998740479754599984287353---75899--97664302368999999999
Q ss_pred HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 98875430256675679999962001235568999999751034443488888775310122111467888764102369
Q gi|254780804|r 154 IEESLLIGQKSISKEAKQILLANLGGDRIASRNELQKLSSYCLEDILITEQHVKDIICDTHVLYIEEIINATIQGKIYNA 233 (352)
Q Consensus 154 i~~~~~~~g~~i~~~a~~~L~~~~g~d~~~l~~EleKL~ly~~~~~~It~~dI~~~v~~~~~~~if~L~dai~~~~~~~a 233 (352)
T Consensus 187 l~~~~~~e~~~~~~~~~~~~~~~~~g~~rd~ls~~dq~~~~~--~~~~~~~~v~~mlg~~~~~~~~~l~~a~~~~d~~~~ 264 (705)
T PRK05648 187 LSHVLGAENVPFEEDALWLLGRAADGSMRDAMSLTDQAIAFG--EGKVLAADVRAMLGTLDHGQVYGVLQALLEGDARAL 264 (705)
T ss_pred HHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCC--CCCCCHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHH
T ss_conf 999999759977899999999974896777999999998606--884079999998588877899999999995689999
Q ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHH
Q ss_conf 99999985311000145899999999999999983025689899998608999976899999998649989999999999
Q gi|254780804|r 234 IMLADFFLASKMPSHALLHGFLQKFQLLEKIHIIKECSNISFEKIIQKTEKNIIPMKRNILQESLRIWNKNLVRETLHKI 313 (352)
Q Consensus 234 ~~~l~~l~~~g~~~~~il~~L~~~f~~L~~~~~~~~~~g~~~~~~~~~~~~p~~~~~k~~~~~q~~~~s~~~l~~~l~~L 313 (352)
T Consensus 265 ~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~q~~p~~----~~~---------~~~~~~~~~~lA~~~s~E~vQL~YQi~ 331 (705)
T PRK05648 265 LEAVRHLAEQGPDWNGVLAEMLNVLHRVAIAQALPEA----VDN---------GQGDRERVLALAQALPAEDVQFYYQMG 331 (705)
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHH----HCC---------CCCHHHHHHHHHHHCCHHHHHHHHHHH
T ss_conf 9999999985889999999999999999999845021----024---------530499999999857999999999999
Q ss_pred HHHHHHHHCCCCCHHHHHHHHHHHHH
Q ss_conf 99999953289998999999999999
Q gi|254780804|r 314 DHRIHLARKKKYLEKNIIFQTILYIA 339 (352)
Q Consensus 314 ~~~d~~~K~~~~~~~~il~~~ll~l~ 339 (352)
T Consensus 332 l~gr~dL~l-APd~r~g~EM~LLRmL 356 (705)
T PRK05648 332 LIGRRDLPL-APDPRGGFEMVLLRML 356 (705)
T ss_pred HHHHHHCCC-CCCCHHHHHHHHHHHH
T ss_conf 840200466-9970364999999998