HHsearch alignment for GI: 254780804 and conserved domain: PRK06645
>PRK06645 DNA polymerase III subunits gamma and tau; Validated.
Probab=99.83 E-value=1.3e-16 Score=128.99 Aligned_cols=309 Identities=14% Similarity=0.118 Sum_probs=236.5
Q ss_pred HHHCCCCEEEEECCCHHHHHHHHHHHHHHHCCCC----------------------CCCCEEEEEEHHH--HHCCHHHHH
Q ss_conf 0101384799956996589999999999733566----------------------6773077620889--641899999
Q gi|254780804|r 16 NLFLSHFVFIFYGSDKGLIFELINQFKKNISITY----------------------HDPFSLVVLNALE--IQKNISTFW 71 (352)
Q Consensus 16 ~~~~~~~iyLi~G~d~~l~~~~~~~l~k~~~~~~----------------------~~~~~~~~~~~~e--~~~d~~~l~ 71 (352)
T Consensus 39 ~~~~~~-aylf~G~rG~GKTt~Ari~ak~lnc~~~~~~~~~~~~c~~c~~c~~i~~~~~~dv~EiDaas~~gv~~ir~l~ 117 (507)
T PRK06645 39 NDRLAG-GYLLTGIRGVGKTTSARIIAKAVNCSALITENTTIKTCEKCTNCISFNNHNHPDIIEIDAASKTSVDDIRRII 117 (507)
T ss_pred CCCCCC-EEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHH
T ss_conf 399663-4774587997889999999999679998888998888888767899865899985996378888889999998
Q ss_pred HHHHCCCCCCCCEEEEEECCCC-HHHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHH
Q ss_conf 9871788888823999847741-045789889885105656079998526543113566765431121014664420013
Q gi|254780804|r 72 NEINSTSLFSKKKIILIENLST-EKKVLDCLEEIIIKNICNHIIIIKSNEIKKNNTLRKIAEKFTSVLAISCYPDNKIHL 150 (352)
Q Consensus 72 ~~~~t~slF~~~klIii~~~~~-~k~~~~~l~~~~~~~~~~~~li~~a~~l~k~~kl~k~~e~~~~~~~v~~~~~~~~~l 150 (352)
T Consensus 118 ~~~~~~p~~~~~kv~iidE~hmls~~a~nallktlEepp~~~~Fi~atte~~ki---p~t--i~srcq~f~~~~i~~~~i 192 (507)
T PRK06645 118 ESAEYKPLQGKHKIFIIDEVHMLSKGAFNALLKTLEEPPPHIIFIFATTEVQKI---PAT--IISRCQRYDLRRLSFEEI 192 (507)
T ss_pred HHCCCCCCCCCEEEEEECCHHHCCHHHHHHHHHHHHCCCCCEEEEEECCCHHHC---CHH--HHHHCEEEEEECCCHHHH
T ss_conf 635517876743589952142248999999999742786443899974853648---378--885432787545997999
Q ss_pred HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHH
Q ss_conf 588988754302566756799999620012355689999997510-3444348888877531012211146788876410
Q gi|254780804|r 151 MDLIEESLLIGQKSISKEAKQILLANLGGDRIASRNELQKLSSYC-LEDILITEQHVKDIICDTHVLYIEEIINATIQGK 229 (352)
Q Consensus 151 ~~~i~~~~~~~g~~i~~~a~~~L~~~~g~d~~~l~~EleKL~ly~-~~~~~It~~dI~~~v~~~~~~~if~L~dai~~~~ 229 (352)
T Consensus 193 ~~~l~~i~~~E~~~~~~~al~~ia~~a~Gs~RDalslldqai~~~~~~~~~I~~~~V~~MLGl~Drs~lidL~e~Il~Gd 272 (507)
T PRK06645 193 FKLLEYITKQENLKADIEALRIIAYKSEGSARDAVSILDQAASMSAKSDNIISPQVINQMLGLVDLSVIIEFVEYIIERE 272 (507)
T ss_pred HHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHCCC
T ss_conf 99999999976877778999999985599867899999999997548987026999999838998567999999998299
Q ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHH
Q ss_conf 23699999998531100014589999999999999998302568989999860899997689999999864998999999
Q gi|254780804|r 230 IYNAIMLADFFLASKMPSHALLHGFLQKFQLLEKIHIIKECSNISFEKIIQKTEKNIIPMKRNILQESLRIWNKNLVRET 309 (352)
Q Consensus 230 ~~~a~~~l~~l~~~g~~~~~il~~L~~~f~~L~~~~~~~~~~g~~~~~~~~~~~~p~~~~~k~~~~~q~~~~s~~~l~~~ 309 (352)
T Consensus 273 ~~kaL~~l~~iy~~G~Dp~~iL~DLLeiih~i~~ik~l---~~~~~---------~l~ese~~ri~~is~ki~~~~L~lf 340 (507)
T PRK06645 273 TEKAINLINKLYGSSVNLEIFIESVSDFIAYLNKVKML---PNYSL---------PIYESFNDRTKSILDKISLPHLSIL 340 (507)
T ss_pred HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHC---CCCCC---------CCCHHHHHHHHHHHHHCCHHHHHHH
T ss_conf 99999999999984999999999999999999999747---87545---------6553079999999983899999999
Q ss_pred HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 9999999999532899989999999999999631
Q gi|254780804|r 310 LHKIDHRIHLARKKKYLEKNIIFQTILYIAQTAC 343 (352)
Q Consensus 310 l~~L~~~d~~~K~~~~~~~~il~~~ll~l~~~a~ 343 (352)
T Consensus 341 WQillKg~eEL~~-apnp~~alEM~LIRL~y~~~ 373 (507)
T PRK06645 341 WQIYNKGVQEIKI-SYNQLTETEMLVIKSIYSTS 373 (507)
T ss_pred HHHHHHHHHHHHH-CCCHHHHHHHHHHHHHHHCC
T ss_conf 9999857999852-89888889999999998477