HHsearch alignment for GI: 254780804 and conserved domain: PRK07133
>PRK07133 DNA polymerase III subunits gamma and tau; Validated.
Probab=99.73 E-value=8.3e-14 Score=110.49 Aligned_cols=303 Identities=11% Similarity=0.113 Sum_probs=218.6
Q ss_pred HHHCCCCEEEEECCCHHHHHHHHHHHHHHHCCC--C-------------CCCCEEEEEEHHH--HHCCHHHHHHHHHCCC
Q ss_conf 010138479995699658999999999973356--6-------------6773077620889--6418999999871788
Q gi|254780804|r 16 NLFLSHFVFIFYGSDKGLIFELINQFKKNISIT--Y-------------HDPFSLVVLNALE--IQKNISTFWNEINSTS 78 (352)
Q Consensus 16 ~~~~~~~iyLi~G~d~~l~~~~~~~l~k~~~~~--~-------------~~~~~~~~~~~~e--~~~d~~~l~~~~~t~s 78 (352)
T Consensus 36 ~gRIaH-AYLF~GPRGvGKTT~ARIfAKaLNC~~~~d~~~pC~~C~~~~~~s~DViEIDAASn~gVDdIReLie~v~y~P 114 (718)
T PRK07133 36 SGKISH-AYLFSGPHGTGKTSVAKIFANALNCSHKTDLIEPCQNCIENFNNNLDIIEMDAASNNGVDEIRELRENVKNLP 114 (718)
T ss_pred CCCCCC-EEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHCCCCCCCEEEECCCCCCCHHHHHHHHHHHCCCC
T ss_conf 499750-5862389986889999999999679999999997702143047898737754556688899999999825588
Q ss_pred CCCCCEEEEEECCCC-HHHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH
Q ss_conf 888823999847741-0457898898851056560799985265431135667654311210146644200135889887
Q gi|254780804|r 79 LFSKKKIILIENLST-EKKVLDCLEEIIIKNICNHIIIIKSNEIKKNNTLRKIAEKFTSVLAISCYPDNKIHLMDLIEES 157 (352)
Q Consensus 79 lF~~~klIii~~~~~-~k~~~~~l~~~~~~~~~~~~li~~a~~l~k~~kl~k~~e~~~~~~~v~~~~~~~~~l~~~i~~~ 157 (352)
T Consensus 115 ~~gkYKVyIIDEvHMLS~~AfNALLKtLEEPP~hvvFILaTTep~KIP---~T--IlSRCQrFdFkrI~~~~I~~~L~~I 189 (718)
T PRK07133 115 QISKYKIYIIDEVHMLSKSAFNALLKTLEEPPKHVIFILATTDVQKIP---LT--ILSRVQRFNFRRISEDVIVHQLENI 189 (718)
T ss_pred CCCCEEEEEEECCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCHHHCC---HH--HHHCCEEEECCCCCHHHHHHHHHHH
T ss_conf 778724999966200799999999985027987827999708825484---87--7412203358889999999999999
Q ss_pred HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf 54302566756799999620012355689999997510344434888887753101221114678887641023699999
Q gi|254780804|r 158 LLIGQKSISKEAKQILLANLGGDRIASRNELQKLSSYCLEDILITEQHVKDIICDTHVLYIEEIINATIQGKIYNAIMLA 237 (352)
Q Consensus 158 ~~~~g~~i~~~a~~~L~~~~g~d~~~l~~EleKL~ly~~~~~~It~~dI~~~v~~~~~~~if~L~dai~~~~~~~a~~~l 237 (352)
T Consensus 190 ~~kE~I~~e~eAL~lIA~~a~GSmRDAlSlLDQv~~f~--ng~it~k~v~~~~Gl~~~~~~i~~~n~~~~~~~~~~l~~l 267 (718)
T PRK07133 190 LEKEKIKYEKNALKLIASLASGSLRDALSIADQVSIFG--NGNITLKNVNELFGLVSNEIVINFLNLLYSKNIKEVLEKL 267 (718)
T ss_pred HHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHC--CCCCCHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHH
T ss_conf 99859977899999999976884888987999999854--8987299999996765579999999999861699999999
Q ss_pred HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
Q ss_conf 99853110001458999999999999999830256898999986089999768999999986499899999999999999
Q gi|254780804|r 238 DFFLASKMPSHALLHGFLQKFQLLEKIHIIKECSNISFEKIIQKTEKNIIPMKRNILQESLRIWNKNLVRETLHKIDHRI 317 (352)
Q Consensus 238 ~~l~~~g~~~~~il~~L~~~f~~L~~~~~~~~~~g~~~~~~~~~~~~p~~~~~k~~~~~q~~~~s~~~l~~~l~~L~~~d 317 (352)
T Consensus 268 ~~~~~~gid~~~l~~~li~~~kd~ii~~~---t~---~~~ll~~~~----~~~l~~----l-kId~~fay~~~e~l~~~l 332 (718)
T PRK07133 268 NQLKFQGIDPELLVISLINLVKDFIVFKK---TK---DNSLLEYYS----EFDLEN----L-KISIDFAYKFIEELMSLL 332 (718)
T ss_pred HHHHHCCCCHHHHHHHHHHHHHHHHEEEC---CC---CHHHHHHCC----HHHHHH----H-EECHHHHHHHHHHHHHHH
T ss_conf 99997588999999999999988832402---57---407987525----887854----1-200999999999999999
Q ss_pred HHHHCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 9953289998999999999999963
Q gi|254780804|r 318 HLARKKKYLEKNIIFQTILYIAQTA 342 (352)
Q Consensus 318 ~~~K~~~~~~~~il~~~ll~l~~~a 342 (352)
T Consensus 333 ~~l~~se~p-~~~~Ei~iikl~~~~ 356 (718)
T PRK07133 333 KDLKFSEFP-FLTLEIFILKLLSLS 356 (718)
T ss_pred HHHHHCCCC-HHHHHHHHHHHHHHC
T ss_conf 987740380-788999999998751