HHsearch alignment for GI: 254780804 and conserved domain: PRK07399

>PRK07399 DNA polymerase III subunit delta'; Validated.
Probab=98.73  E-value=7.8e-06  Score=57.67  Aligned_cols=262  Identities=13%  Similarity=0.096  Sum_probs=140.8

Q ss_pred             HHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCC--------------CCCEEEE---------EEHHHH
Q ss_conf             78875321001013847999569965899999999997335666--------------7730776---------208896
Q gi|254780804|r    7 HKFIQKSTKNLFLSHFVFIFYGSDKGLIFELINQFKKNISITYH--------------DPFSLVV---------LNALEI   63 (352)
Q Consensus         7 ~~~~~~~~~~~~~~~~iyLi~G~d~~l~~~~~~~l~k~~~~~~~--------------~~~~~~~---------~~~~e~   63 (352)
T Consensus        13 ~~~L~~ai~~~rl~h-AyLF~Gp~G~GK~~~A~~fa~~Ll~~~~~~~~~~~ri~~~nHPDl~~i~P~~~~~g~~~~~~~~   91 (314)
T PRK07399         13 IELLTAAIEQNRIAP-AYLFAGPEGVGRKLAALRFIEGLLSQGSPSKNIRRRLEEGNHPDLLWVEPTYQHQGKLITASEA   91 (314)
T ss_pred             HHHHHHHHHCCCCCC-EEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCEEEEECCCCCCCCCCCHHHH
T ss_conf             999999998599674-4877899983299999999999857899997665587518999778860562003454557789


Q ss_pred             --------------HCCHHHHHHHHHCCCCCCCCEEEEEECCCCH-HHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHH
Q ss_conf             --------------4189999998717888888239998477410-4578988988510565607999852654311356
Q gi|254780804|r   64 --------------QKNISTFWNEINSTSLFSKKKIILIENLSTE-KKVLDCLEEIIIKNICNHIIIIKSNEIKKNNTLR  128 (352)
Q Consensus        64 --------------~~d~~~l~~~~~t~slF~~~klIii~~~~~~-k~~~~~l~~~~~~~~~~~~li~~a~~l~k~~kl~  128 (352)
T Consensus        92 ~~~~~~~~~~~~I~idqIR~l~~~l~~~p~~~~~kVvII~~ae~m~~~AaNaLLKtLEEP~~~-~fILit~~~~------  164 (314)
T PRK07399         92 EEAGLKRKSPPQIRLEQIREIKRFLSRPPLEAPRKVVVIEDAETMNEAAANALLKTLEEPGNG-TLILIAPSPE------  164 (314)
T ss_pred             HHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCEEEEECCHHHCCHHHHHHHHHHHCCCCCC-EEEEEECCHH------
T ss_conf             876530268777879999999999731885688479998897871999999999861478785-6999979936------


Q ss_pred             HHHHH-HHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHH
Q ss_conf             67654-31121014664420013588988754302566756799999620012355689999997510344434888887
Q gi|254780804|r  129 KIAEK-FTSVLAISCYPDNKIHLMDLIEESLLIGQKSISKEAKQILLANLGGDRIASRNELQKLSSYCLEDILITEQHVK  207 (352)
Q Consensus       129 k~~e~-~~~~~~v~~~~~~~~~l~~~i~~~~~~~g~~i~~~a~~~L~~~~g~d~~~l~~EleKL~ly~~~~~~It~~dI~  207 (352)
T Consensus       165 ~lLpTI~SRCQ~i~F~~l~~~~i~~~L~~~~~~~~~~~~~~~l~~~---A~GspG~a~~~~~~~~~i-------~~e-l~  233 (314)
T PRK07399        165 SLLPTIVSRCQIIPFYRLSDEQLEQVLKRLGDNINEILDHPELLAL---AQGSPGAAIANIEQLQSI-------PPE-LL  233 (314)
T ss_pred             HCCHHHHCCCEEEECCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHH---HCCCHHHHHHHHHHHHHC-------CHH-HH
T ss_conf             4914664187563389989999999999716643310278999988---179979999999998748-------699-99


Q ss_pred             HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCC
Q ss_conf             75310122111467888764102369999999853110001458999999999999999830256898999986089999
Q gi|254780804|r  208 DIICDTHVLYIEEIINATIQGKIYNAIMLADFFLASKMPSHALLHGFLQKFQLLEKIHIIKECSNISFEKIIQKTEKNII  287 (352)
Q Consensus       208 ~~v~~~~~~~if~L~dai~~~~~~~a~~~l~~l~~~g~~~~~il~~L~~~f~~L~~~~~~~~~~g~~~~~~~~~~~~p~~  287 (352)
T Consensus       234 ~~l~~~~-------------~~~~~~l~lak~i~~~----Ld~-------~~qlwl------------------------  265 (314)
T PRK07399        234 QKLEQPP-------------KNPLEALELAKDISEE----LDI-------EQQLWL------------------------  265 (314)
T ss_pred             HHHHCCC-------------CCHHHHHHHHHHHHHH----HHH-------HHHHHH------------------------
T ss_conf             9986245-------------6899999998861266----788-------999999------------------------


Q ss_pred             HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
Q ss_conf             768999999986499899999999999999995328999899999999999996
Q gi|254780804|r  288 PMKRNILQESLRIWNKNLVRETLHKIDHRIHLARKKKYLEKNIIFQTILYIAQT  341 (352)
Q Consensus       288 ~~~k~~~~~q~~~~s~~~l~~~l~~L~~~d~~~K~~~~~~~~il~~~ll~l~~~  341 (352)
T Consensus       266 ---~~~l--q~~~w~~~~~~~~~~~le~~r~~L~~~-vqprL~~Ev~ll~l~~~  313 (314)
T PRK07399        266 ---IDYL--QQHYWQKTKNSQLLKKLEKLRKQLLSY-VQPRLAWEVTLLELSQE  313 (314)
T ss_pred             ---HHHH--HHHHHHHCCCHHHHHHHHHHHHHHHHC-CCCHHHHHHHHHHHHCC
T ss_conf             ---9999--999998600379999999999999852-88089999999999734