HHsearch alignment for GI: 254780804 and conserved domain: PRK07993
>PRK07993 DNA polymerase III subunit delta'; Validated.
Probab=99.07 E-value=1.6e-06 Score=62.29 Aligned_cols=287 Identities=10% Similarity=0.022 Sum_probs=166.1
Q ss_pred HHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHCCCC---C-----------------CCCEEEEEE--HHHHH
Q ss_conf 7887532100101384799956996589999999999733566---6-----------------773077620--88964
Q gi|254780804|r 7 HKFIQKSTKNLFLSHFVFIFYGSDKGLIFELINQFKKNISITY---H-----------------DPFSLVVLN--ALEIQ 64 (352)
Q Consensus 7 ~~~~~~~~~~~~~~~~iyLi~G~d~~l~~~~~~~l~k~~~~~~---~-----------------~~~~~~~~~--~~e~~ 64 (352)
T Consensus 12 ~~l~~~~~~~-rl~H-A~L~~G~~G~Gk~~la~~~a~~llC~~~~~~~~Cg~C~~C~l~~~~~HPD~~~i~pe~~~~~I~ 89 (334)
T PRK07993 12 EKLVGSYQAG-RGHH-ALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRGCQLMQAGTHPDYYTLTPEKGKSSLG 89 (334)
T ss_pred HHHHHHHHCC-CCCE-EEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCCCEEEECCCCCCCCCC
T ss_conf 9999999859-8104-6754799998899999999999818999999999999789998668999847753422345599
Q ss_pred -CCHHHHHHHHHCCCCCCCCEEEEEECCCCH-HHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCC
Q ss_conf -189999998717888888239998477410-457898898851056560799985265431135667654311210146
Q gi|254780804|r 65 -KNISTFWNEINSTSLFSKKKIILIENLSTE-KKVLDCLEEIIIKNICNHIIIIKSNEIKKNNTLRKIAEKFTSVLAISC 142 (352)
Q Consensus 65 -~d~~~l~~~~~t~slF~~~klIii~~~~~~-k~~~~~l~~~~~~~~~~~~li~~a~~l~k~~kl~k~~e~~~~~~~v~~ 142 (352)
T Consensus 90 IdqIR~l~~~~~~~~~~g~~kV~iI~~Ae~mn~~AaNaLLKtLEEPp~~t~~iL~t~~~~~l---LpTI--~SRCq~~~~ 164 (334)
T PRK07993 90 VDAVREVTEKLYEHARLGGAKVVWLPDAALLTDAAANALLKTLEEPPEKTWFFLACREPARL---LATL--RSRCRLHYL 164 (334)
T ss_pred HHHHHHHHHHHHHCCCCCCCEEEEECCHHHHCHHHHHHHHHHHCCCCCCEEEEEECCCHHHC---CCHH--HHHCCCCCC
T ss_conf 99999999998436656994799976677759999999998612799884999866985657---2388--752304158
Q ss_pred CCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCHHHHH
Q ss_conf 64420013588988754302566756799999620012355689999997510344434888887753101221114678
Q gi|254780804|r 143 YPDNKIHLMDLIEESLLIGQKSISKEAKQILLANLGGDRIASRNELQKLSSYCLEDILITEQHVKDIICDTHVLYIEEII 222 (352)
Q Consensus 143 ~~~~~~~l~~~i~~~~~~~g~~i~~~a~~~L~~~~g~d~~~l~~EleKL~ly~~~~~~It~~dI~~~v~~~~~~~if~L~ 222 (352)
T Consensus 165 ~~~~~~~~~~wL~~~-----~~~~~~~~~~al~la~Gspl~A~~l~~------~~~----~~~r~~l~--------~~l~ 221 (334)
T PRK07993 165 APPPEQYALTWLSRE-----VTMSQEALLAALRLSAGAPGAALALLQ------PER----WQQREALC--------QALA 221 (334)
T ss_pred CCCCHHHHHHHHHHH-----CCCCHHHHHHHHHHCCCCHHHHHHHHC------CCH----HHHHHHHH--------HHHH
T ss_conf 997999999999873-----689889999999984998999999825------658----99999999--------9999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHCCC
Q ss_conf 88764102369999999853110001458999999999999999830256898999986089999768999999986499
Q gi|254780804|r 223 NATIQGKIYNAIMLADFFLASKMPSHALLHGFLQKFQLLEKIHIIKECSNISFEKIIQKTEKNIIPMKRNILQESLRIWN 302 (352)
Q Consensus 223 dai~~~~~~~a~~~l~~l~~~g~~~~~il~~L~~~f~~L~~~~~~~~~~g~~~~~~~~~~~~p~~~~~k~~~~~q~~~~s 302 (352)
T Consensus 222 ~~l~~~d~---~~ll~~l~~--~~~~~~L~wl~~ll~D~l~~~-----~~~~--~l-------~n~D~~~~i~~la~~~s 282 (334)
T PRK07993 222 YSLPSGDW---YSLLPALNH--EQAPARLHWLATLLMDALKRQ-----HGAA--QV-------TNVDQPPLVAQLANHLS 282 (334)
T ss_pred HHHCCCCH---HHHHHHHHH--HHHHHHHHHHHHHHHHHHHHH-----CCCC--CE-------ECHHHHHHHHHHHHCCC
T ss_conf 98703679---999999716--348999999999999999986-----0853--01-------48779999999985099
Q ss_pred HHHHHHHHHHHHHHHHHHHCC-CCCHHHHHHHHHHHHHHHH
Q ss_conf 899999999999999995328-9998999999999999963
Q gi|254780804|r 303 KNLVRETLHKIDHRIHLARKK-KYLEKNIIFQTILYIAQTA 342 (352)
Q Consensus 303 ~~~l~~~l~~L~~~d~~~K~~-~~~~~~il~~~ll~l~~~a 342 (352)
T Consensus 283 ~~~L~~~~~~i~~~r~~L~~~~NlN~qLlLE~lll~~~~~l 323 (334)
T PRK07993 283 PARLQAILGDVCHCREQLLSVTGVNRELLLTDLLLRIEHYL 323 (334)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHC
T ss_conf 99999999999999999752689999999999999999973