HHsearch alignment for GI: 254780804 and conserved domain: PRK08691
>PRK08691 DNA polymerase III subunits gamma and tau; Validated.
Probab=99.70 E-value=2.4e-13 Score=107.40 Aligned_cols=308 Identities=14% Similarity=0.103 Sum_probs=223.7
Q ss_pred HHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHCCCC---CCC---------------CEEEEEEHHH--HHCCHHH
Q ss_conf 7532100101384799956996589999999999733566---677---------------3077620889--6418999
Q gi|254780804|r 10 IQKSTKNLFLSHFVFIFYGSDKGLIFELINQFKKNISITY---HDP---------------FSLVVLNALE--IQKNIST 69 (352)
Q Consensus 10 ~~~~~~~~~~~~~iyLi~G~d~~l~~~~~~~l~k~~~~~~---~~~---------------~~~~~~~~~e--~~~d~~~ 69 (352)
T Consensus 28 L~nal~~~rl~h-aylf~G~rGvGKTt~Ari~Ak~lNC~~~~~~~pCg~C~~C~~i~~g~~~D~~EiDaAs~~~vdd~R~ 106 (704)
T PRK08691 28 LQNALDEGRLHH-AYLLTGTRGVGKTTIARILAKSLNCENAQHGEPCGVCQSCTQIDAGRYVDLLEIDAASNTGIDNIRE 106 (704)
T ss_pred HHHHHHHCCCCC-EEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCCCEEEEECCCCCCHHHHHH
T ss_conf 999998199752-3750278987888999999999679999999978777767878558998747742454458899999
Q ss_pred HHHHHHCCCCCCCCEEEEEECCCC-HHHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCH
Q ss_conf 999871788888823999847741-0457898898851056560799985265431135667654311210146644200
Q gi|254780804|r 70 FWNEINSTSLFSKKKIILIENLST-EKKVLDCLEEIIIKNICNHIIIIKSNEIKKNNTLRKIAEKFTSVLAISCYPDNKI 148 (352)
Q Consensus 70 l~~~~~t~slF~~~klIii~~~~~-~k~~~~~l~~~~~~~~~~~~li~~a~~l~k~~kl~k~~e~~~~~~~v~~~~~~~~ 148 (352)
T Consensus 107 l~~~~~y~P~~~~yKVyiiDEvhmLs~~afNAlLKtLEEPP~~v~FilaTTdp~Kl---p~TI--lSRC~~f~l~~~~~~ 181 (704)
T PRK08691 107 VLENAQYAPTAGKYKVYIIDEVHMLSKSAFNAMLKTLEEPPEHVKFILATTDPHKV---PVTV--LSRCLQFVLRNMTAQ 181 (704)
T ss_pred HHHHCCCCCCCCCEEEEEEECHHHCCHHHHHHHHHHHCCCCCCEEEEEECCCHHHC---CHHH--HHHHHHHCCCCCCHH
T ss_conf 99853468867853599983154438999999998614797560899854884647---5899--988877102689999
Q ss_pred HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHH
Q ss_conf 13588988754302566756799999620012355689999997510344434888887753101221114678887641
Q gi|254780804|r 149 HLMDLIEESLLIGQKSISKEAKQILLANLGGDRIASRNELQKLSSYCLEDILITEQHVKDIICDTHVLYIEEIINATIQG 228 (352)
Q Consensus 149 ~l~~~i~~~~~~~g~~i~~~a~~~L~~~~g~d~~~l~~EleKL~ly~~~~~~It~~dI~~~v~~~~~~~if~L~dai~~~ 228 (352)
T Consensus 182 ~i~~~L~~i~~~E~i~~e~~al~~ia~~a~Gs~RDalslldQaia~~--~g~~~~~~v~~mLG~~d~~~~~~ll~al~~~ 259 (704)
T PRK08691 182 QVADHLAHVLDSEKIAYEPPALQLLGRAAAGSMRDALSLLDQAIALG--SGKVAENDVRQMIGAVDKQYLYELLTGIINQ 259 (704)
T ss_pred HHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHC--CCCCCHHHHHHHHCCCCHHHHHHHHHHHHHC
T ss_conf 99999999999839856899999999975785777988999999964--8962699999985888778999999999955
Q ss_pred HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHH
Q ss_conf 02369999999853110001458999999999999999830256898999986089999768999999986499899999
Q gi|254780804|r 229 KIYNAIMLADFFLASKMPSHALLHGFLQKFQLLEKIHIIKECSNISFEKIIQKTEKNIIPMKRNILQESLRIWNKNLVRE 308 (352)
Q Consensus 229 ~~~~a~~~l~~l~~~g~~~~~il~~L~~~f~~L~~~~~~~~~~g~~~~~~~~~~~~p~~~~~k~~~~~q~~~~s~~~l~~ 308 (352)
T Consensus 260 d~~~~~~~~~~~~~~~~~~~~~l~~l~~~lh~ia~~q~~p~~~--~~-----------~~~~~~~~~~la~~~~~e~~Ql 326 (704)
T PRK08691 260 DGAALTAKAQEMAACAVGFDNALGELAILLQQLALIQAVPNAL--AH-----------DDPDSDILHRLAQTISGEQIQL 326 (704)
T ss_pred CHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCHHHC--CC-----------CCCCHHHHHHHHHCCCHHHHHH
T ss_conf 8999999999999868999999999999999999998581310--45-----------6710899999997089999999
Q ss_pred HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
Q ss_conf 9999999999953289998999999999999
Q gi|254780804|r 309 TLHKIDHRIHLARKKKYLEKNIIFQTILYIA 339 (352)
Q Consensus 309 ~l~~L~~~d~~~K~~~~~~~~il~~~ll~l~ 339 (352)
T Consensus 327 ~Yqi~l~gr~dl~~-ap~~~~g~eM~lLRml 356 (704)
T PRK08691 327 YYQIAVHGKRDLSL-APDEYAGFMMTLLRML 356 (704)
T ss_pred HHHHHHHCCCCCCC-CCCCHHHHHHHHHHHH
T ss_conf 99999822022556-9970253999999998