HHsearch alignment for GI: 254780804 and conserved domain: PRK12422
>PRK12422 chromosomal replication initiation protein; Provisional.
Probab=98.08 E-value=0.0011 Score=43.37 Aligned_cols=200 Identities=15% Similarity=0.186 Sum_probs=128.3
Q ss_pred CCEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEEHHHHHCCHHHHHHHHHCCCC------CCCCEEEEEECCC--
Q ss_conf 84799956996589999999999733566677307762088964189999998717888------8882399984774--
Q gi|254780804|r 21 HFVFIFYGSDKGLIFELINQFKKNISITYHDPFSLVVLNALEIQKNISTFWNEINSTSL------FSKKKIILIENLS-- 92 (352)
Q Consensus 21 ~~iyLi~G~d~~l~~~~~~~l~k~~~~~~~~~~~~~~~~~~e~~~d~~~l~~~~~t~sl------F~~~klIii~~~~-- 92 (352)
T Consensus 142 NP-LfIyG~~GlGKTHLL~AIgn~i~~~---~~kV~Yvtae~F~~---~~v~ai~~~~~~~Fr~~yr~~DvLLIDDIQfl 214 (455)
T PRK12422 142 NP-IYLFGPEGSGKTHLMQAAVSALRES---GGKILYVSSELFTE---HLVSAIRSGEMQRFRSFYRNVDALFIEDIEVF 214 (455)
T ss_pred CC-EEEECCCCCCHHHHHHHHHHHHHCC---CCEEEEECHHHHHH---HHHHHHHCCCHHHHHHHHHCCCEEEEEHHHHH
T ss_conf 87-5887899997899999999985379---98699974999999---99999975889999999963887763147887
Q ss_pred -CHHHHHHHHHHHHHCC-CCCEEEEEEECCCCCCHH-HH-HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCHH
Q ss_conf -1045789889885105-656079998526543113-56-6765431121014664420013588988754302566756
Q gi|254780804|r 93 -TEKKVLDCLEEIIIKN-ICNHIIIIKSNEIKKNNT-LR-KIAEKFTSVLAISCYPDNKIHLMDLIEESLLIGQKSISKE 168 (352)
Q Consensus 93 -~~k~~~~~l~~~~~~~-~~~~~li~~a~~l~k~~k-l~-k~~e~~~~~~~v~~~~~~~~~l~~~i~~~~~~~g~~i~~~ 168 (352)
T Consensus 215 ~gK~~tqeEff~tfN~L~~~~KQIVitsDr~P~el~~l~~RL~SRf~~GL~v~I~~Pd~etr~~Il~~k~~~~~~~l~~e 294 (455)
T PRK12422 215 SGKGATQEEFFHTFNSLHTEGKLIVISSSYAPGDLKAMEERLISRFEWGIAIPIHPLTREGLRSFLMRQAEQLSIRIEET 294 (455)
T ss_pred HCCHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHHCCEEECCCCCCHHHHHHHHHHHHHHCCCCCCHH
T ss_conf 28488999999999999985996999689895765126899998863761321689998999999999998718888446
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH---HHC-CCCCCCCHHHHHHHHHCCC------CCCHHHHHHHHHH
Q ss_conf 799999620012355689999997---510-3444348888877531012------2111467888764
Q gi|254780804|r 169 AKQILLANLGGDRIASRNELQKLS---SYC-LEDILITEQHVKDIICDTH------VLYIEEIINATIQ 227 (352)
Q Consensus 169 a~~~L~~~~g~d~~~l~~EleKL~---ly~-~~~~~It~~dI~~~v~~~~------~~~if~L~dai~~ 227 (352)
T Consensus 295 v~~~iA~~i~~niReLeGal~~l~~~~~~~~~~~~~i~~~~~~~~l~d~~~~~~~~~it~~~I~~~Va~ 363 (455)
T PRK12422 295 ALDFLIQALSSNVKTLLHALTLLAKRVAYKKLSHQLLYEDDIKALLHDVLEAAESVRLTPSGIVRAVAQ 363 (455)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH
T ss_conf 899999997551799999999999999987156883649999999998742245765899999999998