HHsearch alignment for GI: 254780804 and conserved domain: PTZ00112
>PTZ00112 origin recognition complex 1 protein; Provisional.
Probab=94.55 E-value=0.36 Score=26.73 Aligned_cols=209 Identities=14% Similarity=0.119 Sum_probs=114.5
Q ss_pred HHHHHHHHHHHHCCCCEEEEECCCHH----HHHHHHHHHHHHHCCCCCCCCEEEEEEHHHHHCCHHHHHHH----HHCC-
Q ss_conf 78875321001013847999569965----89999999999733566677307762088964189999998----7178-
Q gi|254780804|r 7 HKFIQKSTKNLFLSHFVFIFYGSDKG----LIFELINQFKKNISITYHDPFSLVVLNALEIQKNISTFWNE----INST- 77 (352)
Q Consensus 7 ~~~~~~~~~~~~~~~~iyLi~G~d~~----l~~~~~~~l~k~~~~~~~~~~~~~~~~~~e~~~d~~~l~~~----~~t~- 77 (352)
T Consensus 280 ~~Fie~~i~q~GtG~cLY-ISGVPGTGKTATV~eVIr~L~~~~~~~~lp~F~fVEINGMkLt-~P~qaY~~L~e~Ltg~k 357 (650)
T PTZ00112 280 RTFLETGIKQGGTGQILY-ISGVPGTGKTATVYMVIKELQNKKLKGQLPWFNLFEINGVNLV-HPNAAYRVFYKKLFNKK 357 (650)
T ss_pred HHHHHHHCCCCCCCCEEE-EECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEECCEECC-CHHHHHHHHHHHHHCCC
T ss_conf 999986411688665699-9789999800369999999999997089998159997363779-87889999999984898
Q ss_pred ------------CCCCCC---EEEEEECCCCH-HHHHHHHHHHHHCCCC-CEEEEE--EECCCCCCHHHHHHHHHHHHHH
Q ss_conf ------------888882---39998477410-4578988988510565-607999--8526543113566765431121
Q gi|254780804|r 78 ------------SLFSKK---KIILIENLSTE-KKVLDCLEEIIIKNIC-NHIIII--KSNEIKKNNTLRKIAEKFTSVL 138 (352)
Q Consensus 78 ------------slF~~~---klIii~~~~~~-k~~~~~l~~~~~~~~~-~~~li~--~a~~l~k~~kl~k~~e~~~~~~ 138 (352)
T Consensus 358 ~~~~~~A~~lL~k~F~~~r~p~VlLvDELD~LvTkkQ~VlYNLFdWPT~~~SkLIVIaIANTMDLPERL~~RVsSRLGlt 437 (650)
T PTZ00112 358 PPNALNSYKELDKLFNNNRTPSILIVDEADYIVTKTQKVLFTLFDWPTKKNSKLILIIISNTMDLPYKMKPSCRSRLAFG 437 (650)
T ss_pred CCCHHHHHHHHHHHHCCCCCCEEEEECHHHHHHHCCCCEEEECCCCCCCCCCEEEEEEEEECCCCCHHHHHHHHHHCCCC
T ss_conf 88678999999998268997189997157777636774577736688988870799998506786065666655522885
Q ss_pred HCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH--HHHHCCCCCCCCHHHHHHHHHCCCCC
Q ss_conf 0146644200135889887543025667567999996200123556899999--97510344434888887753101221
Q gi|254780804|r 139 AISCYPDNKIHLMDLIEESLLIGQKSISKEAKQILLANLGGDRIASRNELQK--LSSYCLEDILITEQHVKDIICDTHVL 216 (352)
Q Consensus 139 ~v~~~~~~~~~l~~~i~~~~~~~g~~i~~~a~~~L~~~~g~d~~~l~~EleK--L~ly~~~~~~It~~dI~~~v~~~~~~ 216 (352)
T Consensus 438 RltF~PYt~~QL~eII~sRL~~~~-~f~~dAIQl~ARKVAavSGDARRALdICRRAvE~~~~~ki~~~~i~~a~n~~~ns 516 (650)
T PTZ00112 438 RLVFSPYKYQQIEKVIKERLENCE-IIDHTALQLCARRVTNYSGDMRKALQICKLAFENKNGGKITPRDMTRASNMVLDS 516 (650)
T ss_pred EECCCCCCHHHHHHHHHHHHCCCC-CCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHCC
T ss_conf 004399899999999999862677-7887899999888875031489999999999973568734248999998888540
Q ss_pred CH
Q ss_conf 11
Q gi|254780804|r 217 YI 218 (352)
Q Consensus 217 ~i 218 (352)
T Consensus 517 ~~ 518 (650)
T PTZ00112 517 PL 518 (650)
T ss_pred HH
T ss_conf 88