HHsearch alignment for GI: 254780804 and conserved domain: pfam03215

>pfam03215 Rad17 Rad17 cell cycle checkpoint protein.
Probab=95.31  E-value=0.23  Score=28.07  Aligned_cols=173  Identities=18%  Similarity=0.174  Sum_probs=102.6

Q ss_pred             CCEEEEECCCHHHHHHHHHHHHHHHCCCCCC---C-------C--EEEEEEHHH------HHCCHHHHHHHHHC---CCC
Q ss_conf             8479995699658999999999973356667---7-------3--077620889------64189999998717---888
Q gi|254780804|r   21 HFVFIFYGSDKGLIFELINQFKKNISITYHD---P-------F--SLVVLNALE------IQKNISTFWNEINS---TSL   79 (352)
Q Consensus        21 ~~iyLi~G~d~~l~~~~~~~l~k~~~~~~~~---~-------~--~~~~~~~~e------~~~d~~~l~~~~~t---~sl   79 (352)
T Consensus        45 ~~iLlLtGPaG~GKTTTI~lLAkeLG~ei~EW~NP~~~~~~~~~~q~~d~~g~~~~~~~S~~~~F~eFLlr~~ky~sL~~  124 (490)
T pfam03215        45 QLILLLTGPSGCGKSTTVKVLSKELGIEIIEWSNPEYLHNPDNECQKPDFRGDCIVNSLSQMEQFREFLLRGARYGSLQG  124 (490)
T ss_pred             CEEEEEECCCCCCHHHHHHHHHHHHCCEEEEECCCCCCCCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCC
T ss_conf             31899879899889999999999759689981486545677502210121234576666377776788762233565445


Q ss_pred             C-CCCEEEEEECCCC-----HHHHHHHHHHHHHCCC-CCEEEEEEE-CCCCC-CH------HHHHH----HHHHHHHHHC
Q ss_conf             8-8823999847741-----0457898898851056-560799985-26543-11------35667----6543112101
Q gi|254780804|r   80 F-SKKKIILIENLST-----EKKVLDCLEEIIIKNI-CNHIIIIKS-NEIKK-NN------TLRKI----AEKFTSVLAI  140 (352)
Q Consensus        80 F-~~~klIii~~~~~-----~k~~~~~l~~~~~~~~-~~~~li~~a-~~l~k-~~------kl~k~----~e~~~~~~~v  140 (352)
T Consensus       125 ~~~~kriILIEE~Pn~~~~d~~~fr~~L~~~L~s~~~~PlV~IiSEt~s~~g~~~~~~~~~ta~rLlg~eIl~hp~i~~I  204 (490)
T pfam03215       125 GGLKKKLILVEELPNQFYSDAEKFREVIREVLQSIWHLPLIFCLTECNSLEGDNNQDRFGIDAETIMTKDILIMPRIDTI  204 (490)
T ss_pred             CCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCHHHHHCCHHHHHCCCCCEE
T ss_conf             78873599996588744236699999999999708999879999704666677643323210786359888708896369


Q ss_pred             CCCCCCCHHHHHHHHHHHHHCCCC---CCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             466442001358898875430256---67567999996200123556899999975
Q gi|254780804|r  141 SCYPDNKIHLMDLIEESLLIGQKS---ISKEAKQILLANLGGDRIASRNELQKLSS  193 (352)
Q Consensus       141 ~~~~~~~~~l~~~i~~~~~~~g~~---i~~~a~~~L~~~~g~d~~~l~~EleKL~l  193 (352)
T Consensus       205 ~FNpIApT~M~KaL~~I~~kE~~~~~~~~~~~le~Ia~~S~GDIRsAInsLQF~~~  260 (490)
T pfam03215       205 TFNPIAPTFMKKALVRISVQEGKLKSPKSDSKLEVICQEAGGDLRSAINSLQFSSS  260 (490)
T ss_pred             EECCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCC
T ss_conf             86888788999999999998576556752038999998648729999999998626