HHsearch alignment for GI: 254780804 and conserved domain: pfam03215
>pfam03215 Rad17 Rad17 cell cycle checkpoint protein.
Probab=95.31 E-value=0.23 Score=28.07 Aligned_cols=173 Identities=18% Similarity=0.174 Sum_probs=102.6
Q ss_pred CCEEEEECCCHHHHHHHHHHHHHHHCCCCCC---C-------C--EEEEEEHHH------HHCCHHHHHHHHHC---CCC
Q ss_conf 8479995699658999999999973356667---7-------3--077620889------64189999998717---888
Q gi|254780804|r 21 HFVFIFYGSDKGLIFELINQFKKNISITYHD---P-------F--SLVVLNALE------IQKNISTFWNEINS---TSL 79 (352)
Q Consensus 21 ~~iyLi~G~d~~l~~~~~~~l~k~~~~~~~~---~-------~--~~~~~~~~e------~~~d~~~l~~~~~t---~sl 79 (352)
T Consensus 45 ~~iLlLtGPaG~GKTTTI~lLAkeLG~ei~EW~NP~~~~~~~~~~q~~d~~g~~~~~~~S~~~~F~eFLlr~~ky~sL~~ 124 (490)
T pfam03215 45 QLILLLTGPSGCGKSTTVKVLSKELGIEIIEWSNPEYLHNPDNECQKPDFRGDCIVNSLSQMEQFREFLLRGARYGSLQG 124 (490)
T ss_pred CEEEEEECCCCCCHHHHHHHHHHHHCCEEEEECCCCCCCCCCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCC
T ss_conf 31899879899889999999999759689981486545677502210121234576666377776788762233565445
Q ss_pred C-CCCEEEEEECCCC-----HHHHHHHHHHHHHCCC-CCEEEEEEE-CCCCC-CH------HHHHH----HHHHHHHHHC
Q ss_conf 8-8823999847741-----0457898898851056-560799985-26543-11------35667----6543112101
Q gi|254780804|r 80 F-SKKKIILIENLST-----EKKVLDCLEEIIIKNI-CNHIIIIKS-NEIKK-NN------TLRKI----AEKFTSVLAI 140 (352)
Q Consensus 80 F-~~~klIii~~~~~-----~k~~~~~l~~~~~~~~-~~~~li~~a-~~l~k-~~------kl~k~----~e~~~~~~~v 140 (352)
T Consensus 125 ~~~~kriILIEE~Pn~~~~d~~~fr~~L~~~L~s~~~~PlV~IiSEt~s~~g~~~~~~~~~ta~rLlg~eIl~hp~i~~I 204 (490)
T pfam03215 125 GGLKKKLILVEELPNQFYSDAEKFREVIREVLQSIWHLPLIFCLTECNSLEGDNNQDRFGIDAETIMTKDILIMPRIDTI 204 (490)
T ss_pred CCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCHHHHHCCHHHHHCCCCCEE
T ss_conf 78873599996588744236699999999999708999879999704666677643323210786359888708896369
Q ss_pred CCCCCCCHHHHHHHHHHHHHCCCC---CCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 466442001358898875430256---67567999996200123556899999975
Q gi|254780804|r 141 SCYPDNKIHLMDLIEESLLIGQKS---ISKEAKQILLANLGGDRIASRNELQKLSS 193 (352)
Q Consensus 141 ~~~~~~~~~l~~~i~~~~~~~g~~---i~~~a~~~L~~~~g~d~~~l~~EleKL~l 193 (352)
T Consensus 205 ~FNpIApT~M~KaL~~I~~kE~~~~~~~~~~~le~Ia~~S~GDIRsAInsLQF~~~ 260 (490)
T pfam03215 205 TFNPIAPTFMKKALVRISVQEGKLKSPKSDSKLEVICQEAGGDLRSAINSLQFSSS 260 (490)
T ss_pred EECCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCC
T ss_conf 86888788999999999998576556752038999998648729999999998626