HHsearch alignment of GI: 254780804 and MMDB domain: 1jql_B_
>1jql_B (B:) DNA polymerase III, delta subunit; processivity clamp, clamp loader, DNA replication, AAA+ ATPase, transferase; HET: DNA; 2.50A {Escherichia coli}
Probab=99.78 E-value=2.4e-18 Score=140.15 Aligned_cols=136 Identities=11% Similarity=0.163 Sum_probs=117.4
Q ss_pred CCCCCHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEEHHHHHCCHHHHHHHHHCCCCC
Q ss_conf 97633378875321001013847999569965899999999997335666773077620889641899999987178888
Q gi|254780804|r 1 MATIESHKFIQKSTKNLFLSHFVFIFYGSDKGLIFELINQFKKNISITYHDPFSLVVLNALEIQKNISTFWNEINSTSLF 80 (352)
Q Consensus 1 ~~~i~~~~~~~~~~~~~~~~~~iyLi~G~d~~l~~~~~~~l~k~~~~~~~~~~~~~~~~~~e~~~d~~~l~~~~~t~slF 80 (352)
|..|+..++-+..++++ .++|++||+|.|++++.++.+.+.+..+ +.+++...+++.+. |++.+.+++.|+|||
T Consensus 1 Mm~~~~~~l~~~~~~~~---~~~yll~G~e~~l~~~~~~~i~~~~~~~-~~~~~~~~~~~~~~--~~~~l~~~~~t~slf 74 (140)
T 1jql_B 1 MIRLYPEQLRAQLNEGL---RAAYLLLGNDPLLLQESQDAVRQVAAAQ-GFEEHHTFSIDPNT--DWNAIFSLCQAMSLF 74 (140)
T ss_dssp CEECCGGGHHHHHHHCC---CSEEEEESSCHHHHHHHHHHHHHHHHHT-TCCEEECCCCSTTC--CHHHHHHHHHCCCTT
T ss_pred CCCCCHHHHHHHHHHCC---CCEEEEECCCHHHHHHHHHHHHHHHHHC-CCCHHEEEECCCCC--CHHHHHHHHHCCCCC
T ss_conf 98579999999987078---8579998580999999999999998757-96241002037899--999999997279976
Q ss_pred CCCEEEEEECCCC--HHHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHH-HHHHHCCC
Q ss_conf 8823999847741--04578988988510565607999852654311356676543-11210146
Q gi|254780804|r 81 SKKKIILIENLST--EKKVLDCLEEIIIKNICNHIIIIKSNEIKKNNTLRKIAEKF-TSVLAISC 142 (352)
Q Consensus 81 ~~~klIii~~~~~--~k~~~~~l~~~~~~~~~~~~li~~a~~l~k~~kl~k~~e~~-~~~~~v~~ 142 (352)
|++|+|+|+++.. .++..+.|.+|+.+|++++++|+.++++++.++.+++++.. +.+..++|
T Consensus 75 ~~~rlViv~~~~~~~~k~~~~~l~~~l~~~~~~~~lii~~~~~~~~~~~~k~~k~~~k~g~vi~~ 139 (140)
T 1jql_B 75 ASRQTLLLLLPENGPNAAINEQLLTLTGLLHDDLLLIVRGNKLSKAQENAAWFTALANRSVQVTC 139 (140)
T ss_dssp CCCEEEEEECCTTCSCTTHHHHHHHHHHHCCSSCCEEEECSSCCTTGGGSHHHHHHGGGCEEEEC
T ss_pred CCCEEECCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHHCCEEEEC
T ss_conf 66585223266667653479999999847999769999955767077877999999959668857