HHsearch alignment of GI: 254780804 and MMDB domain: 1jr3_A_178-243
>1jr3_A (A:178-243) DNA polymerase III subunit gamma; processivity, processivity clamp, clamp loader, AAA+ ATPase, transferase; HET: DNA; 2.70A {Escherichia coli}
Probab=97.43 E-value=0.00046 Score=45.52 Aligned_cols=64 Identities=14% Similarity=0.049 Sum_probs=57.4
Q ss_pred CHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHC
Q ss_conf 001358898875430256675679999962001235568999999751034443488888775310
Q gi|254780804|r 147 KIHLMDLIEESLLIGQKSISKEAKQILLANLGGDRIASRNELQKLSSYCLEDILITEQHVKDIICD 212 (352)
Q Consensus 147 ~~~l~~~i~~~~~~~g~~i~~~a~~~L~~~~g~d~~~l~~EleKL~ly~~~~~~It~~dI~~~v~~ 212 (352)
..++...++..++++|++++++++..|+..++||++...|-|+....+. .++||.++|..+++.
T Consensus 3 ~~~i~~~L~~I~~~E~i~~~~~aL~~ia~~~~Gd~R~aln~Leq~~~~~--~~~it~~~v~~~~Gs 66 (66)
T 1jr3_A 3 VEQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASG--DGQVSTQAVSAMLGT 66 (66)
T ss_dssp HHHHHHHHHHHHHHHTCCBCHHHHHHHHHHSSSCHHHHHHHHHHHHHHT--TTCBCHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHC--CCCCHHHHHHHHHCC
T ss_conf 5789999999999839998999999999831999999999999999817--853249999998489