HHsearch alignment of GI: 254780804 and MMDB domain: 1jr3_A_178-243

>1jr3_A (A:178-243) DNA polymerase III subunit gamma; processivity, processivity clamp, clamp loader, AAA+ ATPase, transferase; HET: DNA; 2.70A {Escherichia coli}
Probab=97.43  E-value=0.00046  Score=45.52  Aligned_cols=64  Identities=14%  Similarity=0.049  Sum_probs=57.4

Q ss_pred             CHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHC
Q ss_conf             001358898875430256675679999962001235568999999751034443488888775310
Q gi|254780804|r  147 KIHLMDLIEESLLIGQKSISKEAKQILLANLGGDRIASRNELQKLSSYCLEDILITEQHVKDIICD  212 (352)
Q Consensus       147 ~~~l~~~i~~~~~~~g~~i~~~a~~~L~~~~g~d~~~l~~EleKL~ly~~~~~~It~~dI~~~v~~  212 (352)
                      ..++...++..++++|++++++++..|+..++||++...|-|+....+.  .++||.++|..+++.
T Consensus         3 ~~~i~~~L~~I~~~E~i~~~~~aL~~ia~~~~Gd~R~aln~Leq~~~~~--~~~it~~~v~~~~Gs   66 (66)
T 1jr3_A            3 VEQIRHQLEHILNEEHIAHEPRALQLLARAAEGSLRDALSLTDQAIASG--DGQVSTQAVSAMLGT   66 (66)
T ss_dssp             HHHHHHHHHHHHHHHTCCBCHHHHHHHHHHSSSCHHHHHHHHHHHHHHT--TTCBCHHHHHHHTTC
T ss_pred             HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHC--CCCCHHHHHHHHHCC
T ss_conf             5789999999999839998999999999831999999999999999817--853249999998489