HHsearch alignment of GI: 254780804 and MMDB domain: 1jr3_A_244-373
>1jr3_A (A:244-373) DNA polymerase III subunit gamma; processivity, processivity clamp, clamp loader, AAA+ ATPase, transferase; HET: DNA; 2.70A {Escherichia coli}
Probab=99.02 E-value=5.6e-09 Score=78.05 Aligned_cols=116 Identities=10% Similarity=-0.036 Sum_probs=98.7
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHH
Q ss_conf 21114678887641023699999998531100014589999999999999998302568989999860899997689999
Q gi|254780804|r 215 VLYIEEIINATIQGKIYNAIMLADFFLASKMPSHALLHGFLQKFQLLEKIHIIKECSNISFEKIIQKTEKNIIPMKRNIL 294 (352)
Q Consensus 215 ~~~if~L~dai~~~~~~~a~~~l~~l~~~g~~~~~il~~L~~~f~~L~~~~~~~~~~g~~~~~~~~~~~~p~~~~~k~~~ 294 (352)
+.++|+++++++.||..+++..++++...|.+|..++..|.++||.++.++.... +.. .+++.+...+
T Consensus 3 ~~~i~~l~~~i~~~d~~~~l~~~~~l~~~G~d~~~~l~~L~~~~R~ll~~k~~~~----~~~--------~~~~~~~~~~ 70 (130)
T 1jr3_A 3 DDQALSLVEAMVEANGERVMALINEAAARGIEWEALLVEMLGLLHRIAMVQLSPA----ALG--------NDMAAIELRM 70 (130)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHTTCTT----CCC--------SGGGGTHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCHH----HHC--------CCCHHHHHHH
T ss_conf 7789999999871899999999999998099999999999999999999982746----330--------4431089999
Q ss_pred HHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 9998649989999999999999999532899989999999999999631
Q gi|254780804|r 295 QESLRIWNKNLVRETLHKIDHRIHLARKKKYLEKNIIFQTILYIAQTAC 343 (352)
Q Consensus 295 ~~q~~~~s~~~l~~~l~~L~~~d~~~K~~~~~~~~il~~~ll~l~~~a~ 343 (352)
.++++.|+.+.+.+++..|.+++..+|. +..+...++-+++++|+.+.
T Consensus 71 ~~~a~~~s~~~L~~~l~~l~~~~~~lk~-s~~~~~~lE~~likl~~~~~ 118 (130)
T 1jr3_A 71 RELARTIPPTDIQLYYQTLLIGRKELPY-APDRRMGVEMTLLRALAFHP 118 (130)
T ss_dssp HHHHHHSCHHHHHHHHHHHHHHHHHTTT-SSSHHHHHHHHHHHHHHTCS
T ss_pred HHHHHCCCHHHHHHHHHHHHHHHHHHHH-CCCHHHHHHHHHHHHHHCCC
T ss_conf 9999679999999999999999999630-89958999999999997388