HHsearch alignment of GI: 254780804 and MMDB domain: 1sxj_D_256-353

>1sxj_D (D:256-353) Activator 1 41 kDa subunit; clamp loader, processivity clamp, DNA sliding clamp, AAA+ ATPase, DNA polymerase; HET: ATG ADP; 2.85A {Saccharomyces cerevisiae}
Probab=91.41  E-value=0.9  Score=23.68  Aligned_cols=97  Identities=11%  Similarity=0.111  Sum_probs=71.1

Q ss_pred             HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCC
Q ss_conf             87753101221114678887641023699999998531100014589999999999999998302568989999860899
Q gi|254780804|r  206 VKDIICDTHVLYIEEIINATIQGKIYNAIMLADFFLASKMPSHALLHGFLQKFQLLEKIHIIKECSNISFEKIIQKTEKN  285 (352)
Q Consensus       206 I~~~v~~~~~~~if~L~dai~~~~~~~a~~~l~~l~~~g~~~~~il~~L~~~f~~L~~~~~~~~~~g~~~~~~~~~~~~p  285 (352)
                      |.++.+......+.++++++..|+..++...++++...|.++..|+..+.+.+.         .....            
T Consensus         1 V~~v~g~p~p~~i~~il~~~~~~~~~~a~~~i~~li~~G~s~~dii~~l~~~i~---------~~~~~------------   59 (98)
T 1sxj_D            1 VEELAGVVPHDILIEIVEKVKSGDFDEIKKYVNTFMKSGWSAASVVNQLHEYYI---------TNDNF------------   59 (98)
T ss_dssp             HHHHHTCCCSHHHHHHHHHHHSCCHHHHHHHHHHHHHTSCCCTTHHHHHHHHHH---------HCSSS------------
T ss_pred             HHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH---------HHCCC------------
T ss_conf             877640478889999998765479999999999999859999999999999998---------74669------------


Q ss_pred             CCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
Q ss_conf             9976899999998649989999999999999999532899989999999999999
Q gi|254780804|r  286 IIPMKRNILQESLRIWNKNLVRETLHKIDHRIHLARKKKYLEKNIIFQTILYIAQ  340 (352)
Q Consensus       286 ~~~~~k~~~~~q~~~~s~~~l~~~l~~L~~~d~~~K~~~~~~~~il~~~ll~l~~  340 (352)
                                      +...-.+++..+.++|..+-. |.++..-+..++..+++
T Consensus        60 ----------------~~~~k~~il~~la~~e~rl~~-G~~e~lQl~~l~~~i~~   97 (98)
T 1sxj_D           60 ----------------DTNFKNQISWLLFTTDSRLNN-GTNEHIQLLNLLVKISQ   97 (98)
T ss_dssp             ----------------CHHHHHHHHHHHHHHHHHHTT-CCCHHHHHHHHHHHHHH
T ss_pred             ----------------CHHHHHHHHHHHHHHHHHHHH-CCCHHHHHHHHHHHHHC
T ss_conf             ----------------989999999999999999984-79989999999999826