HHsearch alignment of GI: 254780804 and MMDB domain: 1sxj_D_256-353
>1sxj_D (D:256-353) Activator 1 41 kDa subunit; clamp loader, processivity clamp, DNA sliding clamp, AAA+ ATPase, DNA polymerase; HET: ATG ADP; 2.85A {Saccharomyces cerevisiae}
Probab=91.41 E-value=0.9 Score=23.68 Aligned_cols=97 Identities=11% Similarity=0.111 Sum_probs=71.1
Q ss_pred HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCC
Q ss_conf 87753101221114678887641023699999998531100014589999999999999998302568989999860899
Q gi|254780804|r 206 VKDIICDTHVLYIEEIINATIQGKIYNAIMLADFFLASKMPSHALLHGFLQKFQLLEKIHIIKECSNISFEKIIQKTEKN 285 (352)
Q Consensus 206 I~~~v~~~~~~~if~L~dai~~~~~~~a~~~l~~l~~~g~~~~~il~~L~~~f~~L~~~~~~~~~~g~~~~~~~~~~~~p 285 (352)
|.++.+......+.++++++..|+..++...++++...|.++..|+..+.+.+. .....
T Consensus 1 V~~v~g~p~p~~i~~il~~~~~~~~~~a~~~i~~li~~G~s~~dii~~l~~~i~---------~~~~~------------ 59 (98)
T 1sxj_D 1 VEELAGVVPHDILIEIVEKVKSGDFDEIKKYVNTFMKSGWSAASVVNQLHEYYI---------TNDNF------------ 59 (98)
T ss_dssp HHHHHTCCCSHHHHHHHHHHHSCCHHHHHHHHHHHHHTSCCCTTHHHHHHHHHH---------HCSSS------------
T ss_pred HHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH---------HHCCC------------
T ss_conf 877640478889999998765479999999999999859999999999999998---------74669------------
Q ss_pred CCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
Q ss_conf 9976899999998649989999999999999999532899989999999999999
Q gi|254780804|r 286 IIPMKRNILQESLRIWNKNLVRETLHKIDHRIHLARKKKYLEKNIIFQTILYIAQ 340 (352)
Q Consensus 286 ~~~~~k~~~~~q~~~~s~~~l~~~l~~L~~~d~~~K~~~~~~~~il~~~ll~l~~ 340 (352)
+...-.+++..+.++|..+-. |.++..-+..++..+++
T Consensus 60 ----------------~~~~k~~il~~la~~e~rl~~-G~~e~lQl~~l~~~i~~ 97 (98)
T 1sxj_D 60 ----------------DTNFKNQISWLLFTTDSRLNN-GTNEHIQLLNLLVKISQ 97 (98)
T ss_dssp ----------------CHHHHHHHHHHHHHHHHHHTT-CCCHHHHHHHHHHHHHH
T ss_pred ----------------CHHHHHHHHHHHHHHHHHHHH-CCCHHHHHHHHHHHHHC
T ss_conf ----------------989999999999999999984-79989999999999826