HHsearch alignment of GI: 254780804 and MMDB domain: 1sxj_E_1-192
>1sxj_E (E:1-192) Activator 1 40 kDa subunit; clamp loader, processivity clamp, DNA sliding clamp, AAA+ ATPase, DNA polymerase; HET: ATG ADP; 2.85A {Saccharomyces cerevisiae}
Probab=93.58 E-value=0.48 Score=25.50 Aligned_cols=101 Identities=11% Similarity=0.044 Sum_probs=63.3
Q ss_pred EEEEECCCHHHHHHHHHHHHHHHCCCCCCCC-----------------------EEEEEEHH-H-------------HHC
Q ss_conf 7999569965899999999997335666773-----------------------07762088-9-------------641
Q gi|254780804|r 23 VFIFYGSDKGLIFELINQFKKNISITYHDPF-----------------------SLVVLNAL-E-------------IQK 65 (352)
Q Consensus 23 iyLi~G~d~~l~~~~~~~l~k~~~~~~~~~~-----------------------~~~~~~~~-e-------------~~~ 65 (352)
.+||||+.---+...+..+.+.+..+..... ........ . ...
T Consensus 38 ~lLl~Gp~G~GKt~~A~~la~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 117 (192)
T 1sxj_E 38 HLLLYGPNGTGKKTRCMALLESIFGPGVYRLKIDVRQFVTASNRKLELNVVSSPYHLEITPSDMGNNDRIVIQELLKEVA 117 (192)
T ss_dssp CEEEECSTTSSHHHHHHTHHHHHSCTTCCC------------------CCEECSSEEEECCC----CCHHHHHHHHHHHT
T ss_pred EEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCEEEEEHHHCCCCCCCEEEEHHHHHH
T ss_conf 69888979998999999999986598632123442222355541333212468870465010134677631200122232
Q ss_pred CHHHHHHHHHCCCCCCCCEEEEEECCCC-HHHHHHHHHHHHHCCCCCEEEEEEECCCCC
Q ss_conf 8999999871788888823999847741-045789889885105656079998526543
Q gi|254780804|r 66 NISTFWNEINSTSLFSKKKIILIENLST-EKKVLDCLEEIIIKNICNHIIIIKSNEIKK 123 (352)
Q Consensus 66 d~~~l~~~~~t~slF~~~klIii~~~~~-~k~~~~~l~~~~~~~~~~~~li~~a~~l~k 123 (352)
....+.+.....+..+..++++++++.. .......+...++.|+.++++|+.+....+
T Consensus 118 ~i~~~~~~~~~~~~~~~~~v~~i~e~~~~~~~~~n~llk~le~~~~~~~fIl~tn~~~~ 176 (192)
T 1sxj_E 118 QMEQVDFQDSKDGLAHRYKCVIINEANSLTKDAQAALRRTMEKYSKNIRLIMVCDSMSP 176 (192)
T ss_dssp TTTC------------CCEEEEEECTTSSCHHHHHHHHHHHHHSTTTEEEEEEESCSCS
T ss_pred HHHCCCHHHCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHCCCCCCCCCCHHHHCCCCC
T ss_conf 22100012114655677418987323335511455665411224222320133001113