HHsearch results for GI: 254780804 and protein with PDBid: 1a5t_A
>1a5t_A Delta prime, HOLB; zinc finger, DNA replication; 2.20A {Escherichia coli K12} SCOP: a.80.1.1 c.37.1.20 PDB: 1jr3_E* 1xxh_E* 1xxi_E* 3glf_E* 3glg_E* 3glh_E* 3gli_E*
Probab=99.32 E-value=8.6e-09 Score=75.80 Aligned_cols=289 Identities=10% Similarity=0.010 Sum_probs=170.9
Q ss_pred HHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCCCC------------------CEEEEEEHH----HH-H
Q ss_conf 887532100101384799956996589999999999733566677------------------307762088----96-4
Q gi|254780804|r 8 KFIQKSTKNLFLSHFVFIFYGSDKGLIFELINQFKKNISITYHDP------------------FSLVVLNAL----EI-Q 64 (352)
Q Consensus 8 ~~~~~~~~~~~~~~~iyLi~G~d~~l~~~~~~~l~k~~~~~~~~~------------------~~~~~~~~~----e~-~ 64 (352)
+-++..-.+...+| -|||+|+..--+...+..+.+.+.-....+ -++..+... .+ .
T Consensus 12 ~~L~~~~~~~~l~h-a~L~~G~~G~GK~~~a~~~a~~llc~~~~~~~~c~~c~~c~~i~~~~hpd~~~i~~~~~~~~i~i 90 (334)
T 1a5t_A 12 EKLVASYQAGRGHH-ALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHCRGCQLMQAGTHPDYYTLAPEKGKNTLGV 90 (334)
T ss_dssp HHHHHHHHTTCCCS-EEEEECCTTSCHHHHHHHHHHHHTCSSCBTTBCCSCSHHHHHHHHTCCTTEEEECCCTTCSSBCH
T ss_pred HHHHHHHHCCCCCE-EEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCCCEEEECCHHCCCCCCH
T ss_conf 99999998699560-36358999988999999999997087998888886668999997579997454321210465789
Q ss_pred CCHHHHHHHHHCCCCCCCCEEEEEECCCC-HHHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCC
Q ss_conf 18999999871788888823999847741-04578988988510565607999852654311356676543112101466
Q gi|254780804|r 65 KNISTFWNEINSTSLFSKKKIILIENLST-EKKVLDCLEEIIIKNICNHIIIIKSNEIKKNNTLRKIAEKFTSVLAISCY 143 (352)
Q Consensus 65 ~d~~~l~~~~~t~slF~~~klIii~~~~~-~k~~~~~l~~~~~~~~~~~~li~~a~~l~k~~kl~k~~e~~~~~~~v~~~ 143 (352)
+++..+.+.+...|.-|++|+|+++++.. .......|...++.||+++++|+.+.+..+ +-..+ ...+..+.+.
T Consensus 91 ~~iR~l~~~~~~~~~~~~~kiiiI~~ad~m~~~a~nalLK~lEeP~~~~~fil~t~~~~~---ll~TI--~SRc~~i~~~ 165 (334)
T 1a5t_A 91 DAVREVTEKLNEHARLGGAKVVWVTDAALLTDAAANALLKTLEEPPAETWFFLATREPER---LLATL--RSRCRLHYLA 165 (334)
T ss_dssp HHHHHHHHHTTSCCTTSSCEEEEESCGGGBCHHHHHHHHHHHTSCCTTEEEEEEESCGGG---SCHHH--HTTSEEEECC
T ss_pred HHHHHHHHHHHHCCCCCCCEEEEECCHHHCCHHHHHHHHHHHHCCCCCCEEEEECCCHHH---CCCCH--HCEEEEEECC
T ss_conf 999999998642644689579997784544865689999998659733134320487663---43525--2605778689
Q ss_pred CCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCHHHHHH
Q ss_conf 44200135889887543025667567999996200123556899999975103444348888877531012211146788
Q gi|254780804|r 144 PDNKIHLMDLIEESLLIGQKSISKEAKQILLANLGGDRIASRNELQKLSSYCLEDILITEQHVKDIICDTHVLYIEEIIN 223 (352)
Q Consensus 144 ~~~~~~l~~~i~~~~~~~g~~i~~~a~~~L~~~~g~d~~~l~~EleKL~ly~~~~~~It~~dI~~~v~~~~~~~if~L~d 223 (352)
+++..++..|+.+ +..++++++..++..++|+.+.+.+-++ .+.-..-...+..+..........+++.
T Consensus 166 ~~~~~~i~~~L~e-----~~~~~~~~~~~i~~~s~G~~~~a~~ll~------~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 234 (334)
T 1a5t_A 166 PPPEQYAVTWLSR-----EVTMSQDALLAALRLSAGSPGAALALFQ------GDNWQARETLCQALAYSVPSGDWYSLLA 234 (334)
T ss_dssp CCCHHHHHHHHHH-----HCCCCHHHHHHHHHHTTTCHHHHHHTTS------SHHHHHHHHHHHHHHHHHHHCCCGGGHH
T ss_pred CCCHHHHHHHHHH-----CCCCCHHHHHHHHHHCCCCHHHHHHHHC------CCHHHHHHHHHHHHHHHHCCCCHHHHHH
T ss_conf 9999999999985-----6999999999999985999999999877------8749999999999971403541999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHCCCH
Q ss_conf 87641023699999998531100014589999999999999998302568989999860899997689999999864998
Q gi|254780804|r 224 ATIQGKIYNAIMLADFFLASKMPSHALLHGFLQKFQLLEKIHIIKECSNISFEKIIQKTEKNIIPMKRNILQESLRIWNK 303 (352)
Q Consensus 224 ai~~~~~~~a~~~l~~l~~~g~~~~~il~~L~~~f~~L~~~~~~~~~~g~~~~~~~~~~~~p~~~~~k~~~~~q~~~~s~ 303 (352)
++...+ ....+..+...++.++ ....+ .. .. +++.....+...+.+++.
T Consensus 235 ~~~~~~-----------------~~~~l~~l~~~l~D~l-----~~~~~--~~----~~---~~~d~~~~i~~l~~~~~~ 283 (334)
T 1a5t_A 235 ALNHEQ-----------------APARLHWLATLLMDAL-----KRHHG--AA----QV---TNVDVPGLVAELANHLSP 283 (334)
T ss_dssp HHCSTT-----------------HHHHHHHHHHHHHHHT-----CC------------C---CCTTCHHHHHHHHHHSCH
T ss_pred HHCCCC-----------------HHHHHHHHHHHHHHHH-----HHCCC--CH----HH---CCCCHHHHHHHHHHHCCH
T ss_conf 978234-----------------9999999999999999-----97468--24----32---172699999999861999
Q ss_pred HHHHHHHHHHHHHHHHHHC-CCCCHHHHHHHHHHHHHHHHHC
Q ss_conf 9999999999999999532-8999899999999999996310
Q gi|254780804|r 304 NLVRETLHKIDHRIHLARK-KKYLEKNIIFQTILYIAQTACK 344 (352)
Q Consensus 304 ~~l~~~l~~L~~~d~~~K~-~~~~~~~il~~~ll~l~~~a~~ 344 (352)
..+.+++..+.++...+.+ .+.+.+..++.+++++.+..+.
T Consensus 284 ~~l~~~~~~i~~~~~~l~~~~NlN~~l~l~~lli~i~~~~~~ 325 (334)
T 1a5t_A 284 SRLQAILGDVCHIREQLMSVTGINRELLITDLLLRIEHYLQP 325 (334)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCCSSHHHHHHHHHHHHHHHTST
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCC
T ss_conf 999999999999999998567999999999999999985488