HHsearch results for GI: 254780804 and protein with PDBid: 1sxj_A
>1sxj_A Activator 1 95 kDa subunit; clamp loader, processivity clamp, DNA sliding clamp, AAA+ ATPase, DNA polymerase; HET: ATG ADP; 2.85A {Saccharomyces cerevisiae} SCOP: a.80.1.1 c.37.1.20
Probab=98.69 E-value=2.3e-06 Score=59.75 Aligned_cols=193 Identities=14% Similarity=0.178 Sum_probs=120.9
Q ss_pred CEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEEHHHHHCCHHHHHH----HHHCCCC-------------CCCCE
Q ss_conf 479995699658999999999973356667730776208896418999999----8717888-------------88823
Q gi|254780804|r 22 FVFIFYGSDKGLIFELINQFKKNISITYHDPFSLVVLNALEIQKNISTFWN----EINSTSL-------------FSKKK 84 (352)
Q Consensus 22 ~iyLi~G~d~~l~~~~~~~l~k~~~~~~~~~~~~~~~~~~e~~~d~~~l~~----~~~t~sl-------------F~~~k 84 (352)
..+||||+.---+...+..+.+.++ +++..+++.+. .+...+.+ ...+.+. -+.++
T Consensus 78 ~~lLL~GPpG~GKTTla~~lAkelg------~~vieiNaSd~-rsk~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (516)
T 1sxj_A 78 RAAMLYGPPGIGKTTAAHLVAQELG------YDILEQNASDV-RSKTLLNAGVKNALDNMSVVGYFKHNEEAQNLNGKHF 150 (516)
T ss_dssp SEEEEECSTTSSHHHHHHHHHHHTT------CEEEEECTTSC-CCHHHHHHTGGGGTTBCCSTTTTTC----CCSSTTSE
T ss_pred CEEEEECCCCHHHHHHHHHHHHHHC------CCEEEEECCCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCE
T ss_conf 7799989997039999999999819------99899717444-5779999999988642012213566543023357834
Q ss_pred EEEEECCCC----HHHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH
Q ss_conf 999847741----0457898898851056560799985265431135667654311210146644200135889887543
Q gi|254780804|r 85 IILIENLST----EKKVLDCLEEIIIKNICNHIIIIKSNEIKKNNTLRKIAEKFTSVLAISCYPDNKIHLMDLIEESLLI 160 (352)
Q Consensus 85 lIii~~~~~----~k~~~~~l~~~~~~~~~~~~li~~a~~l~k~~kl~k~~e~~~~~~~v~~~~~~~~~l~~~i~~~~~~ 160 (352)
+|+++++.. .......+...+... ...+|+.+.... ..+++.+ ...+..+.|.+++..++...+...+.+
T Consensus 151 vIiiDEiD~~~~~~~~~l~~l~~~~~~~--~~piI~i~n~~~-~~~i~~l---~~r~~~I~F~~p~~~~i~~~l~~I~~~ 224 (516)
T 1sxj_A 151 VIIMDEVDGMSGGDRGGVGQLAQFCRKT--STPLILICNERN-LPKMRPF---DRVCLDIQFRRPDANSIKSRLMTIAIR 224 (516)
T ss_dssp EEEECSGGGCCTTSTTHHHHHHHHHHHC--SSCEEEEESCTT-SSTTGGG---TTTSEEEECCCCCHHHHHHHHHHHHHH
T ss_pred EEEEEEHHHCCHHHHHHHHHHHHHHHCC--CCEEEEEECCCC-CCCCCCC---CCEEEEEECCCCCHHHHHHHHHHHHHH
T ss_conf 9999705302015689999999863023--431688844874-4342443---451489844799999999999999997
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH---CCCCCCHHHHHHHHHHHHH
Q ss_conf 025667567999996200123556899999975103444348888877531---0122111467888764102
Q gi|254780804|r 161 GQKSISKEAKQILLANLGGDRIASRNELQKLSSYCLEDILITEQHVKDIIC---DTHVLYIEEIINATIQGKI 230 (352)
Q Consensus 161 ~g~~i~~~a~~~L~~~~g~d~~~l~~EleKL~ly~~~~~~It~~dI~~~v~---~~~~~~if~L~dai~~~~~ 230 (352)
+|+++++++++.|++.++||.+.+.|.|+.++.- .+.++.+++..+.. .....+.|+.+..++.+..
T Consensus 225 E~i~i~~~~l~~I~~~s~GDIR~aIn~Lq~~~~~---~k~~~~~~i~~~~~~~~Kd~~l~~fd~~~kil~~~~ 294 (516)
T 1sxj_A 225 EKFKLDPNVIDRLIQTTRGDIRQVINLLSTISTT---TKTINHENINEISKAWEKNIALKPFDIAHKMLDGQI 294 (516)
T ss_dssp HTCCCCTTHHHHHHHHTTTCHHHHHHHHTHHHHH---SSCCCTTHHHHHHHHHHTTTTSHHHHHHHHHTBGGG
T ss_pred CCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHC---CCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCC
T ss_conf 4999975589999998399899999999999965---998889999999712134434899999999970544