HHsearch results for GI: 254780804 and protein with PDBid: 1sxj_B
>1sxj_B Activator 1 37 kDa subunit; clamp loader, processivity clamp, DNA sliding clamp, AAA+ ATPase, DNA polymerase; HET: ATG ADP; 2.85A {Saccharomyces cerevisiae} SCOP: a.80.1.1 c.37.1.20
Probab=99.33 E-value=5.1e-09 Score=77.34 Aligned_cols=282 Identities=11% Similarity=0.049 Sum_probs=180.4
Q ss_pred HHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEEHHHHHCCH----HHHHHHHHC--CCCCCCC
Q ss_conf 7532100101384799956996589999999999733566677307762088964189----999998717--8888882
Q gi|254780804|r 10 IQKSTKNLFLSHFVFIFYGSDKGLIFELINQFKKNISITYHDPFSLVVLNALEIQKNI----STFWNEINS--TSLFSKK 83 (352)
Q Consensus 10 ~~~~~~~~~~~~~iyLi~G~d~~l~~~~~~~l~k~~~~~~~~~~~~~~~~~~e~~~d~----~~l~~~~~t--~slF~~~ 83 (352)
+++.-++...+| +||||+.---+...+..+.+.+..+.. ...+..+...+. ... ..+.+.+.+ .+..+.+
T Consensus 33 L~~~i~~~~~p~--lLl~GP~G~GKTtla~~la~~l~~~~~-~~~~~~~~~~~~-~~~~~i~~~i~~~~~~~~~~~~~~~ 108 (323)
T 1sxj_B 33 LQQIAKDGNMPH--MIISGMPGIGKTTSVHCLAHELLGRSY-ADGVLELNASDD-RGIDVVRNQIKHFAQKKLHLPPGKH 108 (323)
T ss_dssp HHHHHHSCCCCC--EEEECSTTSSHHHHHHHHHHHHHGGGH-HHHEEEECTTSC-CSHHHHHTHHHHHHHBCCCCCTTCC
T ss_pred HHHHHHCCCCCE--EEEECCCCCCHHHHHHHHHHHHCCCCC-CCCCEEEECCCC-CCHHHHHHHHHHHHHHCCCCCCCCE
T ss_conf 999997799997--988895999899999999998669977-776324411001-5749999999987652023667764
Q ss_pred EEEEEECCCCH-HHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCC
Q ss_conf 39998477410-45789889885105656079998526543113566765431121014664420013588988754302
Q gi|254780804|r 84 KIILIENLSTE-KKVLDCLEEIIIKNICNHIIIIKSNEIKKNNTLRKIAEKFTSVLAISCYPDNKIHLMDLIEESLLIGQ 162 (352)
Q Consensus 84 klIii~~~~~~-k~~~~~l~~~~~~~~~~~~li~~a~~l~k~~kl~k~~e~~~~~~~v~~~~~~~~~l~~~i~~~~~~~g 162 (352)
++++++++... ......+...++.++..+.+++......+ +...+ ...+..+.+.+.+..++..++...+.+++
T Consensus 109 kiiiide~d~~~~~~q~~l~~~~e~~~~~~~~i~~~~~~~~---i~~~i--~sRc~~i~~~~~~~~~i~~~L~~I~~~e~ 183 (323)
T 1sxj_B 109 KIVILDEADSMTAGAQQALRRTMELYSNSTRFAFACNQSNK---IIEPL--QSQCAILRYSKLSDEDVLKRLLQIIKLED 183 (323)
T ss_dssp EEEEEESGGGSCHHHHHTTHHHHHHTTTTEEEEEEESCGGG---SCHHH--HTTSEEEECCCCCHHHHHHHHHHHHHHHT
T ss_pred EEEEEEECCCCCCHHHHHHHHHCCCCCCCEEEEEECCCCCC---CCHHH--HHHHHHHHHCCCCHHHHHHHHHHHHHHCC
T ss_conf 89998411111100221455401356532134430364021---34677--76676766236877789999999999839
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHH-H
Q ss_conf 566756799999620012355689999997510344434888887753101221114678887641023699999998-5
Q gi|254780804|r 163 KSISKEAKQILLANLGGDRIASRNELQKLSSYCLEDILITEQHVKDIICDTHVLYIEEIINATIQGKIYNAIMLADFF-L 241 (352)
Q Consensus 163 ~~i~~~a~~~L~~~~g~d~~~l~~EleKL~ly~~~~~~It~~dI~~~v~~~~~~~if~L~dai~~~~~~~a~~~l~~l-~ 241 (352)
+.++++.+..++..++||.+.+.+.++..... .+.++.+++..++..... .++.+.+..++..+++..+... .
T Consensus 184 i~~~~~~i~~i~~~s~GdlR~ain~Lq~~~~~---~~~i~~~~i~~~~~~~~~---~~i~~~~~~~~~~~~~~~~~~~l~ 257 (323)
T 1sxj_B 184 VKYTNDGLEAIIFTAEGDMRQAINNLQSTVAG---HGLVNADNVFKIVDSPHP---LIVKKMLLASNLEDSIQILRTDLW 257 (323)
T ss_dssp CCBCHHHHHHHHHHHTTCHHHHHHHHHHHHHH---HSSBCHHHHHHHHTSCCH---HHHHHHHSCSSHHHHHHHHHHTTT
T ss_pred CCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHC---CCCCCHHHHHHHHCCCCH---HHHHHHHHCCCHHHHHHHHHHHHH
T ss_conf 99898999999998699699999999999965---998789999998589769---999999982886999999999999
Q ss_pred HHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 31100014589999999999999998302568989999860899997689999999864998999999999999999953
Q gi|254780804|r 242 ASKMPSHALLHGFLQKFQLLEKIHIIKECSNISFEKIIQKTEKNIIPMKRNILQESLRIWNKNLVRETLHKIDHRIHLAR 321 (352)
Q Consensus 242 ~~g~~~~~il~~L~~~f~~L~~~~~~~~~~g~~~~~~~~~~~~p~~~~~k~~~~~q~~~~s~~~l~~~l~~L~~~d~~~K 321 (352)
..|.++..++..+.+.++. ....+......++..+.+++..+.
T Consensus 258 ~~g~s~~dii~~l~~~~~~-------------------------------------~~~~~~~~~~~li~~i~~~~~rl~ 300 (323)
T 1sxj_B 258 KKGYSSIDIVTTSFRVTKN-------------------------------------LAQVKESVRLEMIKEIGLTHMRIL 300 (323)
T ss_dssp TTTCCHHHHHHHHHHHHHT-------------------------------------CTTSCHHHHHHHHHHHHHHHHHHH
T ss_pred HCCCCHHHHHHHHHHHHHH-------------------------------------HHHCCHHHHHHHHHHHHHHHHHHH
T ss_conf 8599999999999999998-------------------------------------611897889999999999999998
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHC
Q ss_conf 28999899999999999996310
Q gi|254780804|r 322 KKKYLEKNIIFQTILYIAQTACK 344 (352)
Q Consensus 322 ~~~~~~~~il~~~ll~l~~~a~~ 344 (352)
.+. .+..-++.++.+++..-+|
T Consensus 301 ~g~-~~~l~l~~ll~~~~~i~~~ 322 (323)
T 1sxj_B 301 EGV-GTYLQLASMLAKIHKLNNK 322 (323)
T ss_dssp TTC-CCHHHHHHHHHHHHHHTTC
T ss_pred HCC-CHHHHHHHHHHHHHHHHCC
T ss_conf 279-8799999999999998635