HHsearch results for GI: 254780804 and protein with PDBid: 1sxj_C
>1sxj_C Activator 1 40 kDa subunit; clamp loader, processivity clamp, DNA sliding clamp, AAA+ ATPase, DNA polymerase; HET: ATG ADP; 2.85A {Saccharomyces cerevisiae} SCOP: a.80.1.1 c.37.1.20
Probab=99.49 E-value=4.4e-11 Score=90.98 Aligned_cols=283 Identities=13% Similarity=0.096 Sum_probs=188.6
Q ss_pred HHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEE-----HHHHHCCHHHHHHHHHCCCCCCCCE
Q ss_conf 75321001013847999569965899999999997335666773077620-----8896418999999871788888823
Q gi|254780804|r 10 IQKSTKNLFLSHFVFIFYGSDKGLIFELINQFKKNISITYHDPFSLVVLN-----ALEIQKNISTFWNEINSTSLFSKKK 84 (352)
Q Consensus 10 ~~~~~~~~~~~~~iyLi~G~d~~l~~~~~~~l~k~~~~~~~~~~~~~~~~-----~~e~~~d~~~l~~~~~t~slF~~~k 84 (352)
++..-++-..+| +||||+.---+...+..+.+....+.... +...+. +.+.... ..........+..+++|
T Consensus 37 l~~~i~~~~~~~--lLl~GppG~GKTtla~~la~~~~~~~~~~-~~~~~~~~~~~~i~~~~~-~~~~~~~~~~~~~~~~k 112 (340)
T 1sxj_C 37 VRKFVDEGKLPH--LLFYGPPGTGKTSTIVALAREIYGKNYSN-MVLELNASDDRGIDVVRN-QIKDFASTRQIFSKGFK 112 (340)
T ss_dssp HHHHHHTTCCCC--EEEECSSSSSHHHHHHHHHHHHHTTSHHH-HEEEECTTSCCSHHHHHT-HHHHHHHBCCSSSCSCE
T ss_pred HHHHHHCCCCCE--EEEECCCCCCHHHHHHHHHHHHHCCCCCC-CEEEECCCCCCCHHHHHH-HHHHHHHHHHHCCCCEE
T ss_conf 999997799986--98889599999999999999862466776-346623433477258988-88887776651457748
Q ss_pred EEEEECCCCH-HHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCC
Q ss_conf 9998477410-457898898851056560799985265431135667654311210146644200135889887543025
Q gi|254780804|r 85 IILIENLSTE-KKVLDCLEEIIIKNICNHIIIIKSNEIKKNNTLRKIAEKFTSVLAISCYPDNKIHLMDLIEESLLIGQK 163 (352)
Q Consensus 85 lIii~~~~~~-k~~~~~l~~~~~~~~~~~~li~~a~~l~k~~kl~k~~e~~~~~~~v~~~~~~~~~l~~~i~~~~~~~g~ 163 (352)
+|+++++... ......|...++.++..+.+++.+....+-. ..+ ...+..+.+.+.+..++..++.+.+.+++.
T Consensus 113 viiiDe~d~l~~~~qn~Ll~~le~~~~~~~~il~~n~~~~i~---~~l--~sr~~~~~~~~~~~~~i~~~l~~i~~~e~~ 187 (340)
T 1sxj_C 113 LIILDEADAMTNAAQNALRRVIERYTKNTRFCVLANYAHKLT---PAL--LSQCTRFRFQPLPQEAIERRIANVLVHEKL 187 (340)
T ss_dssp EEEETTGGGSCHHHHHHHHHHHHHTTTTEEEEEEESCGGGSC---HHH--HTTSEEEECCCCCHHHHHHHHHHHHHTTTC
T ss_pred EEEEECHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHH---HHH--HHHHHHHHCCCCCHHHHHHHHHHHHHHCCC
T ss_conf 999955324137779999999985576526643147065526---877--534551013789879999999999987799
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC--CCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 667567999996200123556899999975103--444348888877531012211146788876410236999999985
Q gi|254780804|r 164 SISKEAKQILLANLGGDRIASRNELQKLSSYCL--EDILITEQHVKDIICDTHVLYIEEIINATIQGKIYNAIMLADFFL 241 (352)
Q Consensus 164 ~i~~~a~~~L~~~~g~d~~~l~~EleKL~ly~~--~~~~It~~dI~~~v~~~~~~~if~L~dai~~~~~~~a~~~l~~l~ 241 (352)
.+++++++.++..++||.+.+.+.|+++..+.. +...++.+.+..+++......+.++++++..++...+...+.++.
T Consensus 188 ~~~~~~l~~i~~~s~Gd~R~ai~~Lq~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~i~~l~~~i~~~d~~~~~~~l~~l~ 267 (340)
T 1sxj_C 188 KLSPNAEKALIELSNGDMRRVLNVLQSCKATLDNPDEDEISDDVIYECCGAPRPSDLKAVLKSILEDDWGTAHYTLNKVR 267 (340)
T ss_dssp CBCHHHHHHHHHHHTTCHHHHHHHTTTTTTTTCSSSCCCBCHHHHHHHTTCCCHHHHHHHHHHHHTSCHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHH
T ss_conf 99899999999985998999999999999845676643017999998838855999999999998599999999999999
Q ss_pred HH-HCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 31-10001458999999999999999830256898999986089999768999999986499899999999999999995
Q gi|254780804|r 242 AS-KMPSHALLHGFLQKFQLLEKIHIIKECSNISFEKIIQKTEKNIIPMKRNILQESLRIWNKNLVRETLHKIDHRIHLA 320 (352)
Q Consensus 242 ~~-g~~~~~il~~L~~~f~~L~~~~~~~~~~g~~~~~~~~~~~~p~~~~~k~~~~~q~~~~s~~~l~~~l~~L~~~d~~~ 320 (352)
.. |.++..++..+.+.+ ......+ .....+++..+.++|..+
T Consensus 268 ~~~g~~~~dil~~l~~~l---------~~~~~~~----------------------------~~~~~~li~~i~~~~~~l 310 (340)
T 1sxj_C 268 SAKGLALIDLIEGIVKIL---------EDYELQN----------------------------EETRVHLLTKLADIEYSI 310 (340)
T ss_dssp HTTTCCHHHHHHHHHHHH---------TTSCCSS----------------------------HHHHHHHHHHHHHHHHHH
T ss_pred HHCCCCHHHHHHHHHHHH---------HHHCCCC----------------------------HHHHHHHHHHHHHHHHHH
T ss_conf 856999999999999999---------9807899----------------------------799999999999999999
Q ss_pred HCCCCCHHHHHHHHHHHHH
Q ss_conf 3289998999999999999
Q gi|254780804|r 321 RKKKYLEKNIIFQTILYIA 339 (352)
Q Consensus 321 K~~~~~~~~il~~~ll~l~ 339 (352)
.. +..+..-+.-++..+.
T Consensus 311 ~~-~~~~~l~l~~ll~~~~ 328 (340)
T 1sxj_C 311 SK-GGNDQIQGSAVIGAIK 328 (340)
T ss_dssp TT-CCCHHHHHHHHHHHHH
T ss_pred HH-CCCHHHHHHHHHHHHH
T ss_conf 83-8987899999999999