Probab=93.72 E-value=0.18 Score=25.66 Aligned_cols=196 Identities=18% Similarity=0.218 Sum_probs=101.4 Q ss_pred HHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEEHHHHHCCHHHHHHHHH---CCCC---- Q ss_conf 788753210010138479995699658999999999973356667730776208896418999999871---7888---- Q gi|254780804|r 7 HKFIQKSTKNLFLSHFVFIFYGSDKGLIFELINQFKKNISITYHDPFSLVVLNALEIQKNISTFWNEIN---STSL---- 79 (352) Q Consensus 7 ~~~~~~~~~~~~~~~~iyLi~G~d~~l~~~~~~~l~k~~~~~~~~~~~~~~~~~~e~~~d~~~l~~~~~---t~sl---- 79 (352) +++++....-.....+ ++++|+.---+...++.+.. .......++. ..+...+ +.......+. ...+ T Consensus 10 ~~~~~~~~~~a~~~~p-vlI~Ge~GtGK~~~A~~ih~-~s~~~~~~~~--~~~~~~~--~~~~~~~~lfg~~~~~~~~~~ 83 (247) T d1ny5a2 10 KEILEKIKKISCAECP-VLITGESGVGKEVVARLIHK-LSDRSKEPFV--ALNVASI--PRDIFEAELFGYEKGAFTGAV 83 (247) T ss_dssp HHHHHHHHHHTTCCSC-EEEECSTTSSHHHHHHHHHH-HSTTTTSCEE--EEETTTS--CHHHHHHHHHCBCTTSSTTCC T ss_pred HHHHHHHHHHHCCCCC-EEEECCCCCCHHHHHHHHHH-HCCCCCCCCC--CCHHHHH--HHCCCHHHHCCCCCCCCCCCC T ss_conf 9999999999688997-89989998179999999999-6587653320--2102343--101128876285357767753 Q ss_pred ------C--CCCEEEEEECCCC-HHHHHHHHHHHHHC-----------CCCCEEEEEEECC-CCC---CHHHHH-HHHHH Q ss_conf ------8--8823999847741-04578988988510-----------5656079998526-543---113566-76543 Q gi|254780804|r 80 ------F--SKKKIILIENLST-EKKVLDCLEEIIIK-----------NICNHIIIIKSNE-IKK---NNTLRK-IAEKF 134 (352) Q Consensus 80 ------F--~~~klIii~~~~~-~k~~~~~l~~~~~~-----------~~~~~~li~~a~~-l~k---~~kl~k-~~e~~ 134 (352) | ++.-.+++++... .......|..++.. ...++.+|+.+.. +.. ...++. ++..- T Consensus 84 ~~~~g~l~~a~gGtL~l~~i~~L~~~~Q~~L~~~l~~~~~~~~~~~~~~~~~~RlI~~s~~~l~~l~~~~~f~~~L~~~l 163 (247) T d1ny5a2 84 SSKEGFFELADGGTLFLDEIGELSLEAQAKLLRVIESGKFYRLGGRKEIEVNVRILAATNRNIKELVKEGKFREDLYYRL 163 (247) T ss_dssp SCBCCHHHHTTTSEEEEESGGGCCHHHHHHHHHHHHHSEECCBTCCSBEECCCEEEEEESSCHHHHHHTTSSCHHHHHHH T ss_pred CCCCCHHHCCCCCEEEEECHHHCCHHHHHHHHHHHHHCCEEECCCCCCEECCEEEEEECCCCHHHHHHCCCCCHHHHHHC T ss_conf 35588877238997999583759999999999999759878789997023375999933979999988599748888640 Q ss_pred HHHHHCCCCCCC--CHHHHHHHHHHHH----HCCC---CCCHHHHHHHHHHH-HHHHHHHHHHHHHHHHHCCCCCCCCHH Q ss_conf 112101466442--0013588988754----3025---66756799999620-012355689999997510344434888 Q gi|254780804|r 135 TSVLAISCYPDN--KIHLMDLIEESLL----IGQK---SISKEAKQILLANL-GGDRIASRNELQKLSSYCLEDILITEQ 204 (352) Q Consensus 135 ~~~~~v~~~~~~--~~~l~~~i~~~~~----~~g~---~i~~~a~~~L~~~~-g~d~~~l~~EleKL~ly~~~~~~It~~ 204 (352) ....+...|+. ..++..++...+. +.|. .++++|++.|..+- .||...+.+-++.+.+.+.+ ..|+.+ T Consensus 164 -~~~~i~lPpLreR~~Di~~l~~~~l~~~~~~~~~~~~~ls~~al~~L~~~~WPGNl~EL~~~l~~a~~~~~~-~~I~~~ 241 (247) T d1ny5a2 164 -GVIEIEIPPLRERKEDIIPLANHFLKKFSRKYAKEVEGFTKSAQELLLSYPWYGNVRELKNVIERAVLFSEG-KFIDRG 241 (247) T ss_dssp -TTEEEECCCGGGCHHHHHHHHHHHHHHHHHHTTCCCCEECHHHHHHHHHSCCTTHHHHHHHHHHHHHHHCCS-SEECHH T ss_pred -CEEEECCCCHHHCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCC-CEECHH T ss_conf -810655897011624576640013433466507877888999999998489998999999999999981898-858879 Q ss_pred HHHHHH Q ss_conf 887753 Q gi|254780804|r 205 HVKDII 210 (352) Q Consensus 205 dI~~~v 210 (352) |+-.++ T Consensus 242 dl~~l~ 247 (247) T d1ny5a2 242 ELSCLV 247 (247) T ss_dssp HHHHHC T ss_pred HCCCCC T ss_conf 800219
class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Extended AAA-ATPase domain
domain: Transcriptional activator sigm54 (NtrC1), C-terminal domain
species: Aquifex aeolicus [TaxId: 63363]