BLAST/PSIBLAST alignment of GI: 254780804 and GI: 15889999 at iteration 1
>gi|15889999|ref|NP_355680.1| DNA polymerase III subunit delta [Agrobacterium tumefaciens str. C58] Length = 345
>gi|15157968|gb|AAK88465.1| conserved hypothetical protein [Agrobacterium tumefaciens str. C58] Length = 345
 Score =  179 bits (454), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 103/331 (31%), Positives = 183/331 (55%), Gaps = 3/331 (0%)

Query: 1   MATIESHKFIQKSTKNLFLSHFVFIFYGSDKGLIFELINQFKKNISITYHDPFSLVVLNA 60
           MA I+SH+F ++  +N      VF+ YG D+GL+ E      K   I   D F+ + L A
Sbjct: 1   MAEIKSHEF-ERFAENPAERFRVFVLYGPDRGLVSERAGLIAKKTGIDPDDAFASLKLTA 59

Query: 61  LEIQKNISTFWNEINSTSLFSKKKIILIENLSTEKKVLDCLEEIIIKNICNHIIIIKSNE 120
            ++Q +     +E+N+  LF  +K++ +++ S EK ++D L+ +         +II++ +
Sbjct: 60  SDLQGDPGRLLDEVNAIGLFGGEKLVWVKSASAEKALVDALQILADTPPEASFLIIEAGD 119

Query: 121 IKKNNTLRKIAEKFTSVLAISCYPDNKIHLMDLIEESLLIGQKSISKEAKQILLANLGGD 180
           IKK   LRKIAE   S+ AI CY D+   L  LI++ L      I+  A+Q L+  LGGD
Sbjct: 120 IKKGTGLRKIAEPARSIAAIPCYADDARSLNALIDQELSANNLRIAPAARQRLIEQLGGD 179

Query: 181 RIASRNELQKLSSYCLEDILITEQHVKDIICDTHVLYIEEIINATIQGKIYNAIMLA-DF 239
           RIASRNE++KL+ YCL   +I E  +  II D   +  ++ ++A ++G   NA   A   
Sbjct: 180 RIASRNEIRKLALYCLGADVIEEDDILAIIGDASTVSADDAVDAILKGD-RNAFFHATQK 238

Query: 240 FLASKMPSHALLHGFLQKFQLLEKIHIIKECSNISFEKIIQKTEKNIIPMKRNILQESLR 299
            ++SK P   +L G L++FQLL+++    +       +++Q   ++I   ++ I++ +LR
Sbjct: 239 IISSKTPIFLVLQGCLKQFQLLDQMRAEMDEKKQQAGQVMQTLGRHIHFRRKPIIERALR 298

Query: 300 IWNKNLVRETLHKIDHRIHLARKKKYLEKNI 330
            W    +   ++++   I  +R+++ LE+++
Sbjct: 299 TWQPAAIAREMNRLQAAILQSRQRQSLEESV 329