RPSBLAST alignment of GI: 254780804 and protein with PDBid: 1jr3

>1jr3_D DNA polymerase III, delta subunit; processivity, processivity clamp, clamp loader, AAA+ ATPase, transferase; HET: DNA; 2.70A {Escherichia coli} SCOP: a.80.1.1 c.37.1.20 PDB: 1jqj_C* 1xxh_A* 1xxi_A* 3glf_A* 3glg_A* 3glh_A* 3gli_A* Length = 343

 Score = 77.6 bits (190), Expect = 4e-15
 Identities = 41/316 (12%), Positives = 110/316 (34%), Gaps = 14/316 (4%)

Query: 1   MATIESHKFIQKSTKNLFLSHFVFIFYGSDKGLIFELINQFKKNISITYHDPFSLVVLNA 60
           M  +   +   +  + L      ++  G+D  L+ E  +  ++  +      F      +
Sbjct: 1   MIRLYPEQLRAQLNEGL---RAAYLLLGNDPLLLQESQDAVRQVAA---AQGFEEHHTFS 54

Query: 61  LEIQKNISTFWNEINSTSLFSKKKIILIENLSTEK--KVLDCLEEIIIKNICNHIIIIKS 118
           ++   + +  ++   + SLF+ ++              + + L  +      + ++I++ 
Sbjct: 55  IDPNTDWNAIFSLCQAMSLFASRQTXXXXXPENGPNAAINEQLLTLTGLLHDDLLLIVRG 114

Query: 119 NEIKKNNTLRKIAEKFTSV-LAISCYPDNKIHLMDLIEESLLIGQKSISKEAKQILLANL 177
           N++ K            +  + ++C    +  L   +          +   A Q+L    
Sbjct: 115 NKLSKAQENAAWFTALANRSVQVTCQTPEQAQLPRWVAARAKQLNLELDDAANQVLCYCY 174

Query: 178 GGDRIASRNELQKLSSYCLEDILITEQHVKDIICDTHVLYIEEIINATIQGKIYNAIMLA 237
            G+ +A    L++LS     D  +T   V+  + D         ++A + GK   A+ + 
Sbjct: 175 EGNLLALAQALERLSLLW-PDGKLTLPRVEQAVNDAAHFTPFHWVDALLMGKSKRALHIL 233

Query: 238 DFFLASKMPSHALLHGFLQKFQLLEKIHIIKECSNISFEKIIQKTEKNIIPMKRNILQES 297
                       LL    ++  LL  +       +     +  K    +   +R ++ E+
Sbjct: 234 QQLRLEGSEPVILLRTLQRELLLLVNLKRQSA--HTPLRALFDKH--RVWQNRRGMMGEA 289

Query: 298 LRIWNKNLVRETLHKI 313
           L   ++  +R+ +  +
Sbjct: 290 LNRLSQTQLRQAVQLL 305