HHsearch alignment for GI: 254780805 and conserved domain: COG1342

>COG1342 Predicted DNA-binding proteins [General function prediction only].

Probab=94.65  E-value=0.073  Score=31.97  Aligned_cols=51  Identities=22%  Similarity=0.280  Sum_probs=40.1

Q ss_pred             HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             489999999852101110467999974337877865656543589999876421
Q gi|254780805|r  137 PLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEE  190 (300)
Q Consensus       137 p~e~A~~~~~l~~~~~~t~~~lA~~~G~s~s~V~~~LrLl~L~~~i~~~l~~~~  190 (300)
T Consensus        35 t~eElEAl-RLvD~~~l~QeeAA~rMgISr~Tfwr~l~--sAR~KvA~aLveGk   85 (99)
T COG1342          35 TIEELEAL-RLVDYEGLTQEEAALRMGISRQTFWRLLT--SARKKVADALVEGK   85 (99)
T ss_pred             CHHHHHHH-HHHHHHHCCHHHHHHHHCCCHHHHHHHHH--HHHHHHHHHHHCCC
T ss_conf             29998899-98868610578999984642999999999--99999999985587