HHsearch alignment for GI: 254780805 and conserved domain: PRK12528

>PRK12528 RNA polymerase sigma factor; Provisional.
Probab=91.48  E-value=0.89  Score=24.99  Aligned_cols=28  Identities=25%  Similarity=0.274  Sum_probs=24.1

Q ss_pred             HHHHCCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf             5210111046799997433787786565
Q gi|254780805|r  147 LISEYGYTQNDIGSIVGKSRSHVANILR  174 (300)
Q Consensus       147 l~~~~~~t~~~lA~~~G~s~s~V~~~Lr  174 (300)
T Consensus       130 L~r~~gls~~EIA~~LgiS~~tVk~~l~  157 (167)
T PRK12528        130 LAQVDGLGYGEIATELGISLATVKRYLN  157 (167)
T ss_pred             HHHHHCCCHHHHHHHHCCCHHHHHHHHH
T ss_conf             9998298999999997979999999999