HHsearch alignment for GI: 254780805 and conserved domain: PRK13832
>PRK13832 plasmid partitioning protein; Provisional.
Probab=99.95 E-value=8.4e-27 Score=192.20 Aligned_cols=174 Identities=24% Similarity=0.368 Sum_probs=152.9
Q ss_pred CCEEEEHHHCCCCCCCCCCC-CCHHHHHHHHHHHHHCCCCCCCEEECCCCC--CCCCCCCHHHHHHHHHHHCCCCCCCCC
Q ss_conf 60240389823578999876-898899999998863100155046205654--453335756777776421001354333
Q gi|254780805|r 38 SQDCISIHSIVPNPHNPRNY-FESEGLEDLCQSIKSHGIIQPLIVRAIDNG--LYKIIAGERRFRAAKMASLSEVPVIIR 114 (300)
Q Consensus 38 ~~~~i~i~~i~~~p~~pR~~-~~~~~l~eLa~SI~~~G~lqPi~Vr~~~~g--~y~ii~G~rR~rAa~~~g~~~ip~iv~ 114 (300)
T Consensus 2 ~L~~vDPraLk~nPd~~R~tks~~qadalLlatIkaVGivqPPvV~~~~dggng~~I~aGhRRv~~aIaA~L~eI~VlV~ 81 (518)
T PRK13832 2 ELRKVDPRALKDNPDNTRRTKSSPQADALLLATIKAVGIVQPPVVAPESDGGNGYIIDAGHRRVKQAIAAGLEEIQVLVT 81 (518)
T ss_pred CCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEECCCCCCEEEEEECCHHHHHHHHCCCCEEEEEEE
T ss_conf 74103804314599963568897567999998766410446864421268985268850536899988647554789972
Q ss_pred CCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CH
Q ss_conf 46411234556665431022104899999998521011104679999743378778656565435899998764210-16
Q gi|254780805|r 115 NVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEI-SL 193 (300)
Q Consensus 115 ~~~d~~~~~~~l~EN~~R~dl~p~e~A~~~~~l~~~~~~t~~~lA~~~G~s~s~V~~~LrLl~L~~~i~~~l~~~~i-s~ 193 (300)
T Consensus 82 e~~~d~~amrs~~EN~aRE~mnpvDqWRaierlva-lGwTeeaIa~ALal~vrqiRkLrLLAnv~PamLd~ma~GdmP~e 160 (518)
T PRK13832 82 EAANDNGAMRSMVENIAREPLNPVDQWRAIERLVA-LGWTEEAIAVALALPVRQIRKLRLLANVLPAMLDHMAKGDMPNE 160 (518)
T ss_pred CCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH-CCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCH
T ss_conf 16775178999998764067986999999999998-49988999999668999999999997655799999844788759
Q ss_pred HHHHHH--HHCCHHHHHHHHH
Q ss_conf 777776--4010046899997
Q gi|254780805|r 194 GHARTL--VSTSDPLSLAQVI 212 (300)
Q Consensus 194 ghar~L--l~~~~~~~la~~I 212 (300)
T Consensus 161 ~qlrtiA~asldeQ~eVWk~~ 181 (518)
T PRK13832 161 QQLRTIAAASLDEQKEVWKAH 181 (518)
T ss_pred HHHHHHHHCCHHHHHHHHHHC
T ss_conf 999998716878899999850