HHsearch alignment of GI: 254780805 and MMDB domain: 1y9q_A_1-76
>1y9q_A (A:1-76) Transcriptional regulator, HTH_3 family; transcriptional regulaator, strucutral genomics, protein structure initiative, PSI; 1.90A {Vibrio cholerae}
Probab=93.15 E-value=0.085 Score=31.11 Aligned_cols=39 Identities=18% Similarity=0.201 Sum_probs=32.1
Q ss_pred HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 999999985210111046799997433787786565654
Q gi|254780805|r 139 EEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILK 177 (300)
Q Consensus 139 e~A~~~~~l~~~~~~t~~~lA~~~G~s~s~V~~~LrLl~ 177 (300)
.-+..++.+....|+||.++|+++|.|+++|+++..=-.
T Consensus 11 ~~~~~lk~~r~~~gltq~~lA~~~gis~~~i~~~e~g~~ 49 (76)
T 1y9q_A 11 QIANQLKNLRKSRGLSLDATAQLTGVSKAXLGQIERGES 49 (76)
T ss_dssp HHHHHHHHHHHHTTCCHHHHHHHHSSCHHHHHHHHTTCS
T ss_pred HHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHCCCC
T ss_conf 999999999998299999999998949999999976997