HHsearch alignment of GI: 254780805 and MMDB domain: 3hef_A_

>3hef_A (A:) Gene 1 protein; bacteriophage SF6, terminase small subunit GP1, GP1 octameric assembly, GP1 channel, DNA recognition, DNA packaging; 1.65A {Enterobacteria phage SF6}
Probab=90.51  E-value=0.37  Score=27.01  Aligned_cols=119  Identities=16%  Similarity=0.063  Sum_probs=67.7

Q ss_pred             HHHHHHHHHHHHHCCCCHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHH---H
Q ss_conf             899999998521011104679999743-378778656565435899998764210167777764010046899997---4
Q gi|254780805|r  138 LEEALGYEQLISEYGYTQNDIGSIVGK-SRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTSDPLSLAQVI---V  213 (300)
Q Consensus       138 ~e~A~~~~~l~~~~~~t~~~lA~~~G~-s~s~V~~~LrLl~L~~~i~~~l~~~~is~ghar~Ll~~~~~~~la~~I---i  213 (300)
                      -|.+..+..++. .|.|..+||..+|. |++|+.+.+   +-.|+..+.+..+....           ...+++.+   +
T Consensus        18 ~e~~~~i~~~~~-~G~s~~~Ia~~~gips~~Tl~~W~---~~~~ef~e~~~~ak~~~-----------~~~v~~~l~~~A   82 (143)
T 3hef_A           18 PEVADDICSLLS-SGESLLKVCKRPGMPDKSTVFRWL---AKHEDFRDKYAKATEAR-----------ADSIFEEIFEIA   82 (143)
T ss_dssp             HHHHHHHHHHHH-TTCCHHHHHTSTTCCCHHHHHHHT---TTCHHHHHHHHHHHHHH-----------HHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHH-CCCCHHHHHHCCCCCCHHHHHHHH---HHCHHHHHHHHHHHHHH-----------HHHHHHHHHHHH
T ss_conf             999999999998-798799998727999689999999---81789999999999999-----------999999999999


Q ss_pred             HCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEECCCC-CEEEEEEECCHHHHH
Q ss_conf             22247789999997641022222234566556897899999999997398799971798-228999858989999
Q gi|254780805|r  214 SKKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNN-KGQFCIKYETNEQLK  287 (300)
Q Consensus       214 ~~~LSVRe~E~lVk~~~~~~~~~kk~~~~~~~k~~~i~~le~~L~~~lGtkV~I~~~~~-kGkI~I~f~s~eeLe  287 (300)
                      .+..--..+.+.++                ......+--|.+...+..|.|+++.+.+. .|-|.+.-..+++|+
T Consensus        83 ~~~~~~~~~~~~~~----------------~~~~A~~f~L~~~~p~~y~dk~~~e~tg~~g~~i~~~~~~~~~l~  141 (143)
T 3hef_A           83 DNAIPDAAEVAKAR----------------LRVDTRKWALARMNPRKYGDKVTNELVGKDGGAIQIETSPMSTLF  141 (143)
T ss_dssp             HTCCSSHHHHHHHH----------------HHHHHHHHHHHHHSHHHHSCCEEEEEECGGGSCCCEEEC------
T ss_pred             HCCCCCHHHHHHHH----------------HHHHHHHHHHHCCCHHHCCCCCCCCCCCCCCCCEEEEECCCHHHC
T ss_conf             60113527887777----------------888899999972681313654320035789986588732405332