HHsearch alignment of GI: 254780805 and MMDB domain: 3ivp_A_1-73

>3ivp_A (A:1-73) Putative transposon-related DNA-binding protein; APC62618, structural genomics, PSI-2, protein structure initiative; HET: PG4; 2.02A {Clostridium difficile 630}
Probab=94.03  E-value=0.074  Score=31.51  Aligned_cols=44  Identities=14%  Similarity=0.156  Sum_probs=36.0

Q ss_pred             CCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             21048999999985210111046799997433787786565654
Q gi|254780805|r  134 DLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILK  177 (300)
Q Consensus       134 dl~p~e~A~~~~~l~~~~~~t~~~lA~~~G~s~s~V~~~LrLl~  177 (300)
                      .++...-+..++.+.++.|+||.++|+.+|.|+++|+++..=-.
T Consensus         7 ~~~~~~i~~~ik~lr~~~~lsq~elA~~lgis~~~i~~~e~G~~   50 (73)
T 3ivp_A            7 KYDFRALGLAIKEARKKQGLTREQVGAXIEIDPRYLTNIENKGQ   50 (73)
T ss_dssp             SCCTHHHHHHHHHHHHHTTCCHHHHHHHHTCCHHHHHHHHHSCC
T ss_pred             HCCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHCCC
T ss_conf             04899999999999998399999997653989749998962467