HHsearch alignment of GI: 254780805 and MMDB domain: 3ivp_A_1-73
>3ivp_A (A:1-73) Putative transposon-related DNA-binding protein; APC62618, structural genomics, PSI-2, protein structure initiative; HET: PG4; 2.02A {Clostridium difficile 630}
Probab=94.03 E-value=0.074 Score=31.51 Aligned_cols=44 Identities=14% Similarity=0.156 Sum_probs=36.0
Q ss_pred CCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 21048999999985210111046799997433787786565654
Q gi|254780805|r 134 DLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILK 177 (300)
Q Consensus 134 dl~p~e~A~~~~~l~~~~~~t~~~lA~~~G~s~s~V~~~LrLl~ 177 (300)
.++...-+..++.+.++.|+||.++|+.+|.|+++|+++..=-.
T Consensus 7 ~~~~~~i~~~ik~lr~~~~lsq~elA~~lgis~~~i~~~e~G~~ 50 (73)
T 3ivp_A 7 KYDFRALGLAIKEARKKQGLTREQVGAXIEIDPRYLTNIENKGQ 50 (73)
T ss_dssp SCCTHHHHHHHHHHHHHTTCCHHHHHHHHTCCHHHHHHHHHSCC
T ss_pred HCCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHCCC
T ss_conf 04899999999999998399999997653989749998962467