HHsearch results for GI: 254780805 and protein with PDBid: 1y9q_A

>1y9q_A Transcriptional regulator, HTH_3 family; transcriptional regulaator, strucutral genomics, protein structure initiative, PSI; 1.90A {Vibrio cholerae} SCOP: a.35.1.8 b.82.1.15
Probab=90.47  E-value=0.18  Score=27.99  Aligned_cols=38  Identities=18%  Similarity=0.234  Sum_probs=32.4

Q ss_pred             HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf             48999999985210111046799997433787786565
Q gi|254780805|r  137 PLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILR  174 (300)
Q Consensus       137 p~e~A~~~~~l~~~~~~t~~~lA~~~G~s~s~V~~~Lr  174 (300)
                      ..+.+..++++..+.|+|++++|+++|.|++++++.-+
T Consensus         9 ~~~ig~rir~~R~~~gls~~~lA~~~gvs~~~ls~iE~   46 (192)
T 1y9q_A            9 KSQIANQLKNLRKSRGLSLDATAQLTGVSKAMLGQIER   46 (192)
T ss_dssp             HHHHHHHHHHHHHHTTCCHHHHHHHHSSCHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHC
T ss_conf             99999999999998199999999998939999999986