HHsearch results for GI: 254780805 and protein with PDBid: 3mky_B
>3mky_B Protein SOPB; partition, F plasmid, centromere, DNA binding protein- complex; HET: DNA; 2.86A {Escherichia coli} PDB: 3mkw_B* 3mkz_A*
Probab=99.85 E-value=8.8e-22 Score=158.54 Aligned_cols=169 Identities=14% Similarity=0.109 Sum_probs=121.7
Q ss_pred CCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHCCH
Q ss_conf 64112345566654310221048999999985210-11104679999743378778656565435899998764-21016
Q gi|254780805|r 116 VDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISE-YGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRK-EEISL 193 (300)
Q Consensus 116 ~~d~~~~~~~l~EN~~R~dl~p~e~A~~~~~l~~~-~~~t~~~lA~~~G~s~s~V~~~LrLl~L~~~i~~~l~~-~~is~ 193 (300)
..+.++-.++..+|-+| ||||+|+|++|++++++ |++||++||+++|+|+++|+|+|+|++||++|++++.+ +.|+.
T Consensus 6 ~~~~~~~~~~~~~n~~r-~lS~~E~a~~y~rlL~~~~~~tq~eLA~~lG~Srs~VS~~L~l~~LP~~I~~~~~~~~~is~ 84 (189)
T 3mky_B 6 HHHHHSSGLVPRGSHYR-PTSAYERGQRYASRLQNEFAGNISALADAENISRKIITRCINTAKLPKSVVALFSHPGELSA 84 (189)
T ss_dssp ------------------CCCHHHHHHHHHHHHHTTTTTCHHHHHHHHTSCHHHHHHHHHHHHSCHHHHHTSSSGGGSCH
T ss_pred CCHHHHHHHCCCCCCCC-CCCHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHCCCCCCH
T ss_conf 20246665346777889-89999999999999986438889999999797999999999886589999999754498798
Q ss_pred HHHHHHHHCCH-----HHHHHHHHHH--CCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCEEE
Q ss_conf 77777640100-----4689999742--2247789999997641022222234566556897899999999997398799
Q gi|254780805|r 194 GHARTLVSTSD-----PLSLAQVIVS--KKMSVRDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNIS 266 (300)
Q Consensus 194 ghar~Ll~~~~-----~~~la~~Ii~--~~LSVRe~E~lVk~~~~~~~~~kk~~~~~~~k~~~i~~le~~L~~~lGtkV~ 266 (300)
+||++|+.+.+ ...++..++. ..++++.+++.++.........++... ..........+..+.
T Consensus 85 ~~a~~L~~l~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~v~ 154 (189)
T 3mky_B 85 RSGDALQKAFTDKEELLKQQASNLHEQKKAGVIFEADEVITLLTSVLKTSSASRT----------SLSSRHQFAPGATVL 154 (189)
T ss_dssp HHHHHHHHHTTTCHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHTTSGGGTC---------------------------
T ss_pred HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHH----------HHHHHHHHCCCEEEE
T ss_conf 9999998041006899999999999987112378799999974045678873114----------678888543581799
Q ss_pred EECCCCCEEEEEEECCHHHHHHHHHHHCC
Q ss_conf 97179822899985898999999998375
Q gi|254780805|r 267 IKHRNNKGQFCIKYETNEQLKIICSLLGE 295 (300)
Q Consensus 267 I~~~~~kGkI~I~f~s~eeLe~Il~kL~~ 295 (300)
++.++..+++.+.+.+.++++.|.+.|..
T Consensus 155 ~~~~~~~~~l~~~~~~~e~le~i~~~L~~ 183 (189)
T 3mky_B 155 YKGDKMVLNLDRSRVPTECIEKIEAILKE 183 (189)
T ss_dssp -----------------------------
T ss_pred EECCCCEEEEEEEECCHHHHHHHHHHHHH
T ss_conf 93798448998622999999999999999