HHSEARCH alignment of GI: 254780805 and SCOP domain: d1r71a_

Alignment
>d1r71a_ a.4.14.1 (A:) Transcriptional repressor protein KorB DNA-binding domain {Escherichia coli [TaxId: 562]}
Probab=99.68  E-value=9.2e-17  Score=124.75  Aligned_cols=75  Identities=23%  Similarity=0.341  Sum_probs=69.8

Q ss_pred             HHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
Q ss_conf             5666543102210489999999852101110467999974337877865656543589999876421016777776
Q gi|254780805|r  124 IAIVENVQRKDLNPLEEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTL  199 (300)
Q Consensus       124 ~~l~EN~~R~dl~p~e~A~~~~~l~~~~~~t~~~lA~~~G~s~s~V~~~LrLl~L~~~i~~~l~~~~is~ghar~L  199 (300)
                      .+++||+||+||+|+|+|.+|++|++. |+|+++||+++|+|++||+++|+|++||+++++++..|.|+..++...
T Consensus         3 ~ql~EN~qR~~L~p~e~A~a~~~l~~~-g~s~~eiA~~~G~s~~~V~~~l~L~~lp~~v~~~~~~g~i~~~~a~~~   77 (114)
T d1r71a_           3 DQVIENLQRNELTPREIADFIGRELAK-GKKKGDIAKEIGKSPAFITQHVTLLDLPEKIADAFNTGRVRDVTVVNE   77 (114)
T ss_dssp             HHHHHHHHTTCCCHHHHHHHHHHHHHT-TCCHHHHHHHHTCCHHHHHHHHGGGSCCHHHHHHHHTTSCCCHHHHHH
T ss_pred             HHHHHHHCCCCCCHHHHHHHHHHHHHH-CCCHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHH
T ss_conf             899998840689999999999999880-998999999977729999999999679999999999499878999999


SCOP domain information

class: All alpha proteins
fold: DNA/RNA-binding 3-helical bundle
superfamily: KorB DNA-binding domain-like
family: KorB DNA-binding domain-like
domain: Transcriptional repressor protein KorB DNA-binding domain
species: Escherichia coli [TaxId: 562]