HHSEARCH alignment of GI: 254780805 and SCOP domain: d2a6ca1

Alignment
>d2a6ca1 a.35.1.13 (A:1-69) HTH-motif protein NE1354 {Nitrosomonas europaea [TaxId: 915]}
Probab=94.07  E-value=0.024  Score=32.09  Aligned_cols=36  Identities=17%  Similarity=0.371  Sum_probs=31.4

Q ss_pred             HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf             999999985210111046799997433787786565
Q gi|254780805|r  139 EEALGYEQLISEYGYTQNDIGSIVGKSRSHVANILR  174 (300)
Q Consensus       139 e~A~~~~~l~~~~~~t~~~lA~~~G~s~s~V~~~Lr  174 (300)
                      +-+..++++..+.|+||+++|+.+|.++++|++..+
T Consensus         6 ~l~~~i~~~r~~~gltq~elA~~~gv~~~~is~ie~   41 (69)
T d2a6ca1           6 QLLIVLQEHLRNSGLTQFKAAELLGVTQPRVSDLMR   41 (69)
T ss_dssp             HHHHHHHHHHHTTTCCHHHHHHHHTSCHHHHHHHHT
T ss_pred             HHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHC
T ss_conf             999999999999699999999998747847999976


SCOP domain information

class: All alpha proteins
fold: lambda repressor-like DNA-binding domains
superfamily: lambda repressor-like DNA-binding domains
family: NE1354
domain: HTH-motif protein NE1354
species: Nitrosomonas europaea [TaxId: 915]