RPSBLAST alignment of GI: 254780805 and protein with PDBid: 1r71
>1r71_A Transcriptional repressor protein KORB; INCP, plasmid partitioning, protein-DNA complex, heilx-turn- helix motif, transcription factor; HET: BRU; 2.20A {Escherichia coli} SCOP: a.4.14.1 Length = 178
Score = 128 bits (323), Expect = 1e-30
Identities = 36/181 (19%), Positives = 74/181 (40%), Gaps = 12/181 (6%)
Query: 97 RFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQN 156
R+R +K A +P I N + ++EN+QR +L P E A + +++ G +
Sbjct: 1 RYRGSKWAGKKSIPAFIDNDY---NEADQVIENLQRNELTPREIADFIGRELAK-GKKKG 56
Query: 157 DIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTS---DPLSLAQVIV 213
DI +GKS + + + +L LP + + + + T+ P + +
Sbjct: 57 DIAKEIGKSPAFITQHVTLLDLPEKIADAFNTGRVRDVTVVNELVTAFKKRPEEVEAWLD 116
Query: 214 SKKMSV-RDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNN 272
+ R T +L++E ++K + + TD E+ + G + ++
Sbjct: 117 DDTQEITRGTVKLLREFLDEKGRDPNT----VDAFNGQTDAERDAEAGDGQDGEDGDQDG 172
Query: 273 K 273
K
Sbjct: 173 K 173