RPSBLAST alignment of GI: 254780805 and protein with PDBid: 1r71

>1r71_A Transcriptional repressor protein KORB; INCP, plasmid partitioning, protein-DNA complex, heilx-turn- helix motif, transcription factor; HET: BRU; 2.20A {Escherichia coli} SCOP: a.4.14.1 Length = 178
 Score =  128 bits (323), Expect = 1e-30
 Identities = 36/181 (19%), Positives = 74/181 (40%), Gaps = 12/181 (6%)

Query: 97  RFRAAKMASLSEVPVIIRNVDNKSSLEIAIVENVQRKDLNPLEEALGYEQLISEYGYTQN 156
           R+R +K A    +P  I N     +    ++EN+QR +L P E A    + +++ G  + 
Sbjct: 1   RYRGSKWAGKKSIPAFIDNDY---NEADQVIENLQRNELTPREIADFIGRELAK-GKKKG 56

Query: 157 DIGSIVGKSRSHVANILRILKLPSSVREMIRKEEISLGHARTLVSTS---DPLSLAQVIV 213
           DI   +GKS + +   + +L LP  + +      +        + T+    P  +   + 
Sbjct: 57  DIAKEIGKSPAFITQHVTLLDLPEKIADAFNTGRVRDVTVVNELVTAFKKRPEEVEAWLD 116

Query: 214 SKKMSV-RDTEELVQEQDNKKEKRKKIFEGSREKEKYLTDLEKKISSKVGLNISIKHRNN 272
                + R T +L++E  ++K +         +     TD E+   +  G +     ++ 
Sbjct: 117 DDTQEITRGTVKLLREFLDEKGRDPNT----VDAFNGQTDAERDAEAGDGQDGEDGDQDG 172

Query: 273 K 273
           K
Sbjct: 173 K 173