HHsearch alignment for GI: 254780806 and conserved domain: COG1110
>COG1110 Reverse gyrase [DNA replication, recombination, and repair].
Probab=93.20 E-value=0.18 Score=28.06 Aligned_cols=37 Identities=35% Similarity=0.457 Sum_probs=31.1
Q ss_pred CCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEE
Q ss_conf 87499998088988889999999999998799599998
Q gi|254780806|r 5 KSRIITIANQKGGVGKTTTAINLSTALAAIGENVLLID 42 (265)
Q Consensus 5 ~~kvI~v~s~KGGvGKTT~a~nlA~~la~~g~rVllID 42 (265)
T Consensus 96 rg~SFaii-APTGvGKTTfg~~~sl~~a~kgkr~yii~ 132 (1187)
T COG1110 96 RGKSFAII-APTGVGKTTFGLLMSLYLAKKGKRVYIIV 132 (1187)
T ss_pred CCCCEEEE-CCCCCCHHHHHHHHHHHHHHCCCEEEEEE
T ss_conf 37844898-27887654799999999875587499996