HHsearch alignment for GI: 254780806 and conserved domain: COG1797
>COG1797 CobB Cobyrinic acid a,c-diamide synthase [Coenzyme metabolism].
Probab=98.47 E-value=4.2e-07 Score=60.93 Aligned_cols=171 Identities=18% Similarity=0.252 Sum_probs=85.6
Q ss_pred EEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHCCCCCCCCCCEEEEEECCCCHHHCCCCCCCCCEE
Q ss_conf 99998088988889999999999998799599998787768011212463334541167630257712102444444200
Q gi|254780806|r 8 IITIANQKGGVGKTTTAINLSTALAAIGENVLLIDLDPQGNASTGLGIELYDRKYSSYDLLIEEKNINQILIQTAIPNLS 87 (265)
Q Consensus 8 vI~v~s~KGGvGKTT~a~nlA~~la~~g~rVllID~D~q~~~~~~l~~~~~~~~~ti~~~l~~~~~l~~~i~~~~~~~l~ 87 (265)
T Consensus 2 ~vvIAg~~SG~GKTTvT~glm~aL~~rg~~VqpfKvGPD----------YIDP--~~H~~atG----------~~srNLD 59 (451)
T COG1797 2 AVVIAGTSSGSGKTTVTLGLMRALRRRGLKVQPFKVGPD----------YIDP--GYHTAATG----------RPSRNLD 59 (451)
T ss_pred CEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCC----------CCCC--HHHHHHHC----------CCCCCCC
T ss_conf 359954888885899999999999866872166556878----------6381--35667638----------8567776
Q ss_pred ECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEECCCCC--------CCCCCHHHHHH--HCCCCCCCCC
Q ss_conf 0148874577500012322221023332247651027820331013332--------22210112331--0011111231
Q gi|254780806|r 88 IIPSTMDLLGIEMILGGEKDRLFRLDKALSVQLTSDFSYIFLDCPPSFN--------LLTMNAMAAAD--SILVPLQCEF 157 (265)
Q Consensus 88 iipa~~~~~~~~~~l~~~~~~~~~l~~~l~~~l~~~yD~IiiD~pp~~~--------~~~~~al~aad--~viip~~p~~ 157 (265)
T Consensus 60 ~~------------mm~~----~~v~~~f-~~~~~~adi~vIEGVMGLfDG~~~~~~~gSTA~lAk~l~~PVvLVid~~~ 122 (451)
T COG1797 60 SW------------MMGE----EGVRALF-ARAAADADIAVIEGVMGLFDGRGSATDTGSTADLAKLLGAPVVLVVDASG 122 (451)
T ss_pred HH------------HCCH----HHHHHHH-HHHCCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHCCCEEEEEECCC
T ss_conf 54------------4699----8999999-98627898799961230236887776777799999985999899995752
Q ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCHHHHHHHHH-HHHHHCCCCCCCCCCCCHHHH
Q ss_conf 13788875335777655432026774310020231253100112689-998808520156267868898
Q gi|254780806|r 158 FALEGLSQLLETVEEVRRTVNSALDIQGIILTMFDSRNSLSQQVVSD-VRKNLGGKVYNTVIPRNVRIS 225 (265)
Q Consensus 158 ~s~~~~~~~~~~i~~~~~~~~~~~~~~~iv~N~~~~~~~~~~~~~~~-l~~~~~~~v~~~~Ip~~~~i~ 225 (265)
T Consensus 123 ~s~S-~AAiv~G~----~~fdp~v~iaGVIlNrVgs--erH~~llr~Ale~~~gv~vlG-~lpr~~~l~ 183 (451)
T COG1797 123 LSRS-VAAIVKGF----KHFDPDVNIAGVILNRVGS--ERHYELLRDALEEYTGVPVLG-YLPRDDDLE 183 (451)
T ss_pred HHHH-HHHHHHHH----HHCCCCCCEEEEEEECCCC--HHHHHHHHHHHHHCCCCCEEE-EECCCCCCC
T ss_conf 2578-99999889----8619988257899724777--889999998755327985798-742785567