HHsearch alignment for GI: 254780806 and conserved domain: COG1797

>COG1797 CobB Cobyrinic acid a,c-diamide synthase [Coenzyme metabolism].
Probab=98.47  E-value=4.2e-07  Score=60.93  Aligned_cols=171  Identities=18%  Similarity=0.252  Sum_probs=85.6

Q ss_pred             EEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHCCCCCCCCCCEEEEEECCCCHHHCCCCCCCCCEE
Q ss_conf             99998088988889999999999998799599998787768011212463334541167630257712102444444200
Q gi|254780806|r    8 IITIANQKGGVGKTTTAINLSTALAAIGENVLLIDLDPQGNASTGLGIELYDRKYSSYDLLIEEKNINQILIQTAIPNLS   87 (265)
Q Consensus         8 vI~v~s~KGGvGKTT~a~nlA~~la~~g~rVllID~D~q~~~~~~l~~~~~~~~~ti~~~l~~~~~l~~~i~~~~~~~l~   87 (265)
T Consensus         2 ~vvIAg~~SG~GKTTvT~glm~aL~~rg~~VqpfKvGPD----------YIDP--~~H~~atG----------~~srNLD   59 (451)
T COG1797           2 AVVIAGTSSGSGKTTVTLGLMRALRRRGLKVQPFKVGPD----------YIDP--GYHTAATG----------RPSRNLD   59 (451)
T ss_pred             CEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCC----------CCCC--HHHHHHHC----------CCCCCCC
T ss_conf             359954888885899999999999866872166556878----------6381--35667638----------8567776


Q ss_pred             ECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEECCCCC--------CCCCCHHHHHH--HCCCCCCCCC
Q ss_conf             0148874577500012322221023332247651027820331013332--------22210112331--0011111231
Q gi|254780806|r   88 IIPSTMDLLGIEMILGGEKDRLFRLDKALSVQLTSDFSYIFLDCPPSFN--------LLTMNAMAAAD--SILVPLQCEF  157 (265)
Q Consensus        88 iipa~~~~~~~~~~l~~~~~~~~~l~~~l~~~l~~~yD~IiiD~pp~~~--------~~~~~al~aad--~viip~~p~~  157 (265)
T Consensus        60 ~~------------mm~~----~~v~~~f-~~~~~~adi~vIEGVMGLfDG~~~~~~~gSTA~lAk~l~~PVvLVid~~~  122 (451)
T COG1797          60 SW------------MMGE----EGVRALF-ARAAADADIAVIEGVMGLFDGRGSATDTGSTADLAKLLGAPVVLVVDASG  122 (451)
T ss_pred             HH------------HCCH----HHHHHHH-HHHCCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHCCCEEEEEECCC
T ss_conf             54------------4699----8999999-98627898799961230236887776777799999985999899995752


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCHHHHHHHHH-HHHHHCCCCCCCCCCCCHHHH
Q ss_conf             13788875335777655432026774310020231253100112689-998808520156267868898
Q gi|254780806|r  158 FALEGLSQLLETVEEVRRTVNSALDIQGIILTMFDSRNSLSQQVVSD-VRKNLGGKVYNTVIPRNVRIS  225 (265)
Q Consensus       158 ~s~~~~~~~~~~i~~~~~~~~~~~~~~~iv~N~~~~~~~~~~~~~~~-l~~~~~~~v~~~~Ip~~~~i~  225 (265)
T Consensus       123 ~s~S-~AAiv~G~----~~fdp~v~iaGVIlNrVgs--erH~~llr~Ale~~~gv~vlG-~lpr~~~l~  183 (451)
T COG1797         123 LSRS-VAAIVKGF----KHFDPDVNIAGVILNRVGS--ERHYELLRDALEEYTGVPVLG-YLPRDDDLE  183 (451)
T ss_pred             HHHH-HHHHHHHH----HHCCCCCCEEEEEEECCCC--HHHHHHHHHHHHHCCCCCEEE-EECCCCCCC
T ss_conf             2578-99999889----8619988257899724777--889999998755327985798-742785567