HHsearch alignment for GI: 254780806 and conserved domain: PRK02006

>PRK02006 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional.

Probab=92.98  E-value=0.24  Score=27.37  Aligned_cols=34  Identities=26%  Similarity=0.351  Sum_probs=28.3

Q ss_pred             CCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEE
Q ss_conf             8749999808898888999999999999879959999
Q gi|254780806|r    5 KSRIITIANQKGGVGKTTTAINLSTALAAIGENVLLI   41 (265)
Q Consensus         5 ~~kvI~v~s~KGGvGKTT~a~nlA~~la~~g~rVllI   41 (265)
T Consensus       121 ~~~iIaVT---GTnGKTTTt~li~~iL~~~g~~~~~~  154 (501)
T PRK02006        121 APKVLAIT---GTNGKTTTTSLTGLLCERAGKKVAVA  154 (501)
T ss_pred             CCCEEEEE---CCCCHHHHHHHHHHHHHHCCCCEEEE
T ss_conf             87489993---89966879999999999769974652