HHsearch alignment for GI: 254780806 and conserved domain: PRK06526
>PRK06526 transposase; Provisional.
Probab=95.89 E-value=0.017 Score=33.99 Aligned_cols=32 Identities=31% Similarity=0.353 Sum_probs=29.5
Q ss_pred CCCCCCCHHHHHHHHHHHHHHCCCCEEEEECC
Q ss_conf 08898888999999999999879959999878
Q gi|254780806|r 13 NQKGGVGKTTTAINLSTALAAIGENVLLIDLD 44 (265)
Q Consensus 13 s~KGGvGKTT~a~nlA~~la~~g~rVllID~D 44 (265)
T Consensus 104 ~G~~GtGKThLA~Alg~~A~~~G~~v~f~~~~ 135 (254)
T PRK06526 104 LGPPGTGKTHLAIGLGIRACQAGHRVLFATAA 135 (254)
T ss_pred ECCCCCCHHHHHHHHHHHHHHCCCCEEEEEHH
T ss_conf 89999868999999999999869967998779